Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29286 | 88081;88082;88083 | chr2:178557406;178557405;178557404 | chr2:179422133;179422132;179422131 |
N2AB | 27645 | 83158;83159;83160 | chr2:178557406;178557405;178557404 | chr2:179422133;179422132;179422131 |
N2A | 26718 | 80377;80378;80379 | chr2:178557406;178557405;178557404 | chr2:179422133;179422132;179422131 |
N2B | 20221 | 60886;60887;60888 | chr2:178557406;178557405;178557404 | chr2:179422133;179422132;179422131 |
Novex-1 | 20346 | 61261;61262;61263 | chr2:178557406;178557405;178557404 | chr2:179422133;179422132;179422131 |
Novex-2 | 20413 | 61462;61463;61464 | chr2:178557406;178557405;178557404 | chr2:179422133;179422132;179422131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.901 | N | 0.535 | 0.313 | 0.176091768786 | gnomAD-4.0.0 | 3.18197E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71556E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7577 | likely_pathogenic | 0.7442 | pathogenic | -0.256 | Destabilizing | 0.775 | D | 0.527 | neutral | None | None | None | None | I |
K/C | 0.8957 | likely_pathogenic | 0.9128 | pathogenic | -0.167 | Destabilizing | 0.996 | D | 0.743 | deleterious | None | None | None | None | I |
K/D | 0.9424 | likely_pathogenic | 0.9416 | pathogenic | -0.189 | Destabilizing | 0.923 | D | 0.649 | neutral | None | None | None | None | I |
K/E | 0.6335 | likely_pathogenic | 0.6175 | pathogenic | -0.117 | Destabilizing | 0.722 | D | 0.449 | neutral | N | 0.505565433 | None | None | I |
K/F | 0.9548 | likely_pathogenic | 0.9515 | pathogenic | -0.025 | Destabilizing | 0.987 | D | 0.753 | deleterious | None | None | None | None | I |
K/G | 0.887 | likely_pathogenic | 0.8857 | pathogenic | -0.595 | Destabilizing | 0.775 | D | 0.623 | neutral | None | None | None | None | I |
K/H | 0.6028 | likely_pathogenic | 0.6142 | pathogenic | -1.053 | Destabilizing | 0.989 | D | 0.719 | prob.delet. | None | None | None | None | I |
K/I | 0.708 | likely_pathogenic | 0.6974 | pathogenic | 0.605 | Stabilizing | 0.901 | D | 0.758 | deleterious | N | 0.479446634 | None | None | I |
K/L | 0.6597 | likely_pathogenic | 0.6582 | pathogenic | 0.605 | Stabilizing | 0.775 | D | 0.636 | neutral | None | None | None | None | I |
K/M | 0.5229 | ambiguous | 0.5209 | ambiguous | 0.508 | Stabilizing | 0.996 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/N | 0.86 | likely_pathogenic | 0.848 | pathogenic | -0.193 | Destabilizing | 0.901 | D | 0.535 | neutral | N | 0.485167399 | None | None | I |
K/P | 0.7711 | likely_pathogenic | 0.7775 | pathogenic | 0.348 | Stabilizing | 0.987 | D | 0.706 | prob.neutral | None | None | None | None | I |
K/Q | 0.33 | likely_benign | 0.3348 | benign | -0.292 | Destabilizing | 0.901 | D | 0.552 | neutral | N | 0.476266629 | None | None | I |
K/R | 0.0965 | likely_benign | 0.104 | benign | -0.568 | Destabilizing | 0.008 | N | 0.197 | neutral | N | 0.489369403 | None | None | I |
K/S | 0.8796 | likely_pathogenic | 0.8728 | pathogenic | -0.704 | Destabilizing | 0.633 | D | 0.427 | neutral | None | None | None | None | I |
K/T | 0.5294 | ambiguous | 0.5142 | ambiguous | -0.448 | Destabilizing | 0.075 | N | 0.34 | neutral | N | 0.509147242 | None | None | I |
K/V | 0.6327 | likely_pathogenic | 0.6321 | pathogenic | 0.348 | Stabilizing | 0.923 | D | 0.655 | neutral | None | None | None | None | I |
K/W | 0.9346 | likely_pathogenic | 0.9452 | pathogenic | 0.026 | Stabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | I |
K/Y | 0.8935 | likely_pathogenic | 0.8959 | pathogenic | 0.312 | Stabilizing | 0.987 | D | 0.755 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.