Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29288 | 88087;88088;88089 | chr2:178557400;178557399;178557398 | chr2:179422127;179422126;179422125 |
N2AB | 27647 | 83164;83165;83166 | chr2:178557400;178557399;178557398 | chr2:179422127;179422126;179422125 |
N2A | 26720 | 80383;80384;80385 | chr2:178557400;178557399;178557398 | chr2:179422127;179422126;179422125 |
N2B | 20223 | 60892;60893;60894 | chr2:178557400;178557399;178557398 | chr2:179422127;179422126;179422125 |
Novex-1 | 20348 | 61267;61268;61269 | chr2:178557400;178557399;178557398 | chr2:179422127;179422126;179422125 |
Novex-2 | 20415 | 61468;61469;61470 | chr2:178557400;178557399;178557398 | chr2:179422127;179422126;179422125 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.996 | N | 0.62 | 0.378 | 0.193865811164 | gnomAD-4.0.0 | 1.59097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7303 | likely_pathogenic | 0.7414 | pathogenic | -0.892 | Destabilizing | 0.994 | D | 0.572 | neutral | None | None | None | None | N |
N/C | 0.5476 | ambiguous | 0.5644 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
N/D | 0.692 | likely_pathogenic | 0.6823 | pathogenic | -0.589 | Destabilizing | 0.996 | D | 0.556 | neutral | N | 0.491323145 | None | None | N |
N/E | 0.962 | likely_pathogenic | 0.9551 | pathogenic | -0.428 | Destabilizing | 0.997 | D | 0.62 | neutral | None | None | None | None | N |
N/F | 0.9877 | likely_pathogenic | 0.9865 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
N/G | 0.5553 | ambiguous | 0.5778 | pathogenic | -1.284 | Destabilizing | 0.997 | D | 0.541 | neutral | None | None | None | None | N |
N/H | 0.6791 | likely_pathogenic | 0.6707 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.492590593 | None | None | N |
N/I | 0.9234 | likely_pathogenic | 0.9153 | pathogenic | 0.133 | Stabilizing | 0.999 | D | 0.761 | deleterious | N | 0.499641257 | None | None | N |
N/K | 0.9798 | likely_pathogenic | 0.977 | pathogenic | -0.195 | Destabilizing | 0.996 | D | 0.62 | neutral | N | 0.489917567 | None | None | N |
N/L | 0.8908 | likely_pathogenic | 0.8804 | pathogenic | 0.133 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
N/M | 0.9054 | likely_pathogenic | 0.9022 | pathogenic | 0.457 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
N/P | 0.9567 | likely_pathogenic | 0.9546 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/Q | 0.9277 | likely_pathogenic | 0.9249 | pathogenic | -0.694 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/R | 0.9693 | likely_pathogenic | 0.966 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
N/S | 0.1028 | likely_benign | 0.1094 | benign | -0.964 | Destabilizing | 0.905 | D | 0.371 | neutral | N | 0.47446943 | None | None | N |
N/T | 0.3688 | ambiguous | 0.3334 | benign | -0.592 | Destabilizing | 0.992 | D | 0.589 | neutral | N | 0.466467259 | None | None | N |
N/V | 0.8202 | likely_pathogenic | 0.8251 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
N/W | 0.9946 | likely_pathogenic | 0.9943 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/Y | 0.925 | likely_pathogenic | 0.9116 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.487096864 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.