Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29290 | 88093;88094;88095 | chr2:178557394;178557393;178557392 | chr2:179422121;179422120;179422119 |
N2AB | 27649 | 83170;83171;83172 | chr2:178557394;178557393;178557392 | chr2:179422121;179422120;179422119 |
N2A | 26722 | 80389;80390;80391 | chr2:178557394;178557393;178557392 | chr2:179422121;179422120;179422119 |
N2B | 20225 | 60898;60899;60900 | chr2:178557394;178557393;178557392 | chr2:179422121;179422120;179422119 |
Novex-1 | 20350 | 61273;61274;61275 | chr2:178557394;178557393;178557392 | chr2:179422121;179422120;179422119 |
Novex-2 | 20417 | 61474;61475;61476 | chr2:178557394;178557393;178557392 | chr2:179422121;179422120;179422119 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.106 | N | 0.519 | 0.133 | 0.647776319867 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.0946 | likely_benign | 0.1003 | benign | -0.447 | Destabilizing | 0.007 | N | 0.293 | neutral | None | None | None | None | I |
L/C | 0.3028 | likely_benign | 0.3344 | benign | -0.748 | Destabilizing | 0.628 | D | 0.4 | neutral | None | None | None | None | I |
L/D | 0.4489 | ambiguous | 0.4261 | ambiguous | -0.251 | Destabilizing | 0.072 | N | 0.5 | neutral | None | None | None | None | I |
L/E | 0.2885 | likely_benign | 0.2626 | benign | -0.341 | Destabilizing | 0.072 | N | 0.449 | neutral | None | None | None | None | I |
L/F | 0.1042 | likely_benign | 0.1063 | benign | -0.595 | Destabilizing | 0.072 | N | 0.316 | neutral | None | None | None | None | I |
L/G | 0.2257 | likely_benign | 0.2427 | benign | -0.552 | Destabilizing | 0.072 | N | 0.445 | neutral | None | None | None | None | I |
L/H | 0.1415 | likely_benign | 0.1579 | benign | 0.115 | Stabilizing | 0.628 | D | 0.455 | neutral | None | None | None | None | I |
L/I | 0.0712 | likely_benign | 0.0662 | benign | -0.29 | Destabilizing | None | N | 0.158 | neutral | None | None | None | None | I |
L/K | 0.2193 | likely_benign | 0.2133 | benign | -0.327 | Destabilizing | 0.072 | N | 0.417 | neutral | None | None | None | None | I |
L/M | 0.0485 | likely_benign | 0.0573 | benign | -0.574 | Destabilizing | None | N | 0.127 | neutral | N | 0.46926349 | None | None | I |
L/N | 0.1433 | likely_benign | 0.1346 | benign | -0.185 | Destabilizing | 0.072 | N | 0.499 | neutral | None | None | None | None | I |
L/P | 0.4603 | ambiguous | 0.4646 | ambiguous | -0.314 | Destabilizing | 0.106 | N | 0.519 | neutral | N | 0.480576562 | None | None | I |
L/Q | 0.1015 | likely_benign | 0.1146 | benign | -0.365 | Destabilizing | 0.171 | N | 0.538 | neutral | N | 0.456968983 | None | None | I |
L/R | 0.1995 | likely_benign | 0.1988 | benign | 0.148 | Stabilizing | 0.055 | N | 0.493 | neutral | N | 0.451504448 | None | None | I |
L/S | 0.1039 | likely_benign | 0.1179 | benign | -0.566 | Destabilizing | 0.016 | N | 0.369 | neutral | None | None | None | None | I |
L/T | 0.0786 | likely_benign | 0.084 | benign | -0.556 | Destabilizing | None | N | 0.162 | neutral | None | None | None | None | I |
L/V | 0.0668 | likely_benign | 0.0681 | benign | -0.314 | Destabilizing | 0.005 | N | 0.176 | neutral | N | 0.439033796 | None | None | I |
L/W | 0.1793 | likely_benign | 0.2088 | benign | -0.615 | Destabilizing | 0.864 | D | 0.439 | neutral | None | None | None | None | I |
L/Y | 0.2116 | likely_benign | 0.2184 | benign | -0.38 | Destabilizing | 0.356 | N | 0.487 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.