Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29292 | 88099;88100;88101 | chr2:178557388;178557387;178557386 | chr2:179422115;179422114;179422113 |
N2AB | 27651 | 83176;83177;83178 | chr2:178557388;178557387;178557386 | chr2:179422115;179422114;179422113 |
N2A | 26724 | 80395;80396;80397 | chr2:178557388;178557387;178557386 | chr2:179422115;179422114;179422113 |
N2B | 20227 | 60904;60905;60906 | chr2:178557388;178557387;178557386 | chr2:179422115;179422114;179422113 |
Novex-1 | 20352 | 61279;61280;61281 | chr2:178557388;178557387;178557386 | chr2:179422115;179422114;179422113 |
Novex-2 | 20419 | 61480;61481;61482 | chr2:178557388;178557387;178557386 | chr2:179422115;179422114;179422113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.892 | N | 0.653 | 0.319 | 0.599966047421 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | rs1445509592 | None | 0.011 | N | 0.219 | 0.097 | 0.350307294319 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92678E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1445509592 | None | 0.011 | N | 0.219 | 0.097 | 0.350307294319 | gnomAD-4.0.0 | 2.56162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.84848E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8826 | likely_pathogenic | 0.8888 | pathogenic | -2.344 | Highly Destabilizing | 0.845 | D | 0.529 | neutral | None | None | None | None | N |
I/C | 0.8529 | likely_pathogenic | 0.8781 | pathogenic | -1.368 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
I/D | 0.9952 | likely_pathogenic | 0.9949 | pathogenic | -2.812 | Highly Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
I/E | 0.9858 | likely_pathogenic | 0.9833 | pathogenic | -2.561 | Highly Destabilizing | 0.987 | D | 0.781 | deleterious | None | None | None | None | N |
I/F | 0.6666 | likely_pathogenic | 0.6876 | pathogenic | -1.389 | Destabilizing | 0.967 | D | 0.677 | prob.neutral | N | 0.488939607 | None | None | N |
I/G | 0.9781 | likely_pathogenic | 0.9789 | pathogenic | -2.897 | Highly Destabilizing | 0.987 | D | 0.78 | deleterious | None | None | None | None | N |
I/H | 0.9752 | likely_pathogenic | 0.977 | pathogenic | -2.517 | Highly Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
I/K | 0.9732 | likely_pathogenic | 0.9724 | pathogenic | -1.724 | Destabilizing | 0.987 | D | 0.781 | deleterious | None | None | None | None | N |
I/L | 0.2173 | likely_benign | 0.2417 | benign | -0.731 | Destabilizing | 0.426 | N | 0.359 | neutral | N | 0.469100606 | None | None | N |
I/M | 0.272 | likely_benign | 0.2755 | benign | -0.598 | Destabilizing | 0.983 | D | 0.674 | neutral | N | 0.498663298 | None | None | N |
I/N | 0.9037 | likely_pathogenic | 0.8932 | pathogenic | -2.136 | Highly Destabilizing | 0.994 | D | 0.801 | deleterious | N | 0.50242228 | None | None | N |
I/P | 0.9622 | likely_pathogenic | 0.9708 | pathogenic | -1.252 | Destabilizing | 0.996 | D | 0.795 | deleterious | None | None | None | None | N |
I/Q | 0.9575 | likely_pathogenic | 0.9568 | pathogenic | -1.945 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
I/R | 0.9602 | likely_pathogenic | 0.9594 | pathogenic | -1.572 | Destabilizing | 0.987 | D | 0.8 | deleterious | None | None | None | None | N |
I/S | 0.8815 | likely_pathogenic | 0.8803 | pathogenic | -2.763 | Highly Destabilizing | 0.983 | D | 0.7 | prob.neutral | N | 0.466272541 | None | None | N |
I/T | 0.8644 | likely_pathogenic | 0.8496 | pathogenic | -2.368 | Highly Destabilizing | 0.892 | D | 0.653 | neutral | N | 0.463794233 | None | None | N |
I/V | 0.1801 | likely_benign | 0.1875 | benign | -1.252 | Destabilizing | 0.011 | N | 0.219 | neutral | N | 0.450792372 | None | None | N |
I/W | 0.9855 | likely_pathogenic | 0.9881 | pathogenic | -1.878 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/Y | 0.9585 | likely_pathogenic | 0.9599 | pathogenic | -1.532 | Destabilizing | 0.987 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.