Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29295 | 88108;88109;88110 | chr2:178557379;178557378;178557377 | chr2:179422106;179422105;179422104 |
N2AB | 27654 | 83185;83186;83187 | chr2:178557379;178557378;178557377 | chr2:179422106;179422105;179422104 |
N2A | 26727 | 80404;80405;80406 | chr2:178557379;178557378;178557377 | chr2:179422106;179422105;179422104 |
N2B | 20230 | 60913;60914;60915 | chr2:178557379;178557378;178557377 | chr2:179422106;179422105;179422104 |
Novex-1 | 20355 | 61288;61289;61290 | chr2:178557379;178557378;178557377 | chr2:179422106;179422105;179422104 |
Novex-2 | 20422 | 61489;61490;61491 | chr2:178557379;178557378;178557377 | chr2:179422106;179422105;179422104 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.103 | N | 0.344 | 0.354 | 0.178374595973 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1075 | likely_benign | 0.1162 | benign | -0.729 | Destabilizing | 0.64 | D | 0.424 | neutral | N | 0.492830855 | None | None | I |
T/C | 0.3917 | ambiguous | 0.4649 | ambiguous | -0.431 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
T/D | 0.6532 | likely_pathogenic | 0.6482 | pathogenic | -1.17 | Destabilizing | 0.851 | D | 0.503 | neutral | None | None | None | None | I |
T/E | 0.6485 | likely_pathogenic | 0.6322 | pathogenic | -0.988 | Destabilizing | 0.919 | D | 0.525 | neutral | None | None | None | None | I |
T/F | 0.6821 | likely_pathogenic | 0.6758 | pathogenic | -0.485 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | I |
T/G | 0.277 | likely_benign | 0.2907 | benign | -1.124 | Destabilizing | 0.851 | D | 0.535 | neutral | None | None | None | None | I |
T/H | 0.4564 | ambiguous | 0.4621 | ambiguous | -1.305 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | I |
T/I | 0.5089 | ambiguous | 0.5273 | ambiguous | 0.3 | Stabilizing | 0.984 | D | 0.621 | neutral | N | 0.511748486 | None | None | I |
T/K | 0.3361 | likely_benign | 0.3465 | ambiguous | -0.484 | Destabilizing | 0.919 | D | 0.522 | neutral | None | None | None | None | I |
T/L | 0.1655 | likely_benign | 0.193 | benign | 0.3 | Stabilizing | 0.919 | D | 0.519 | neutral | None | None | None | None | I |
T/M | 0.1563 | likely_benign | 0.1703 | benign | 0.212 | Stabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
T/N | 0.1488 | likely_benign | 0.149 | benign | -1.109 | Destabilizing | 0.103 | N | 0.241 | neutral | N | 0.491998389 | None | None | I |
T/P | 0.1566 | likely_benign | 0.1712 | benign | -0.012 | Destabilizing | 0.984 | D | 0.622 | neutral | N | 0.490415 | None | None | I |
T/Q | 0.3347 | likely_benign | 0.3347 | benign | -0.858 | Destabilizing | 0.988 | D | 0.631 | neutral | None | None | None | None | I |
T/R | 0.2749 | likely_benign | 0.2943 | benign | -0.687 | Destabilizing | 0.976 | D | 0.619 | neutral | None | None | None | None | I |
T/S | 0.1327 | likely_benign | 0.1342 | benign | -1.282 | Destabilizing | 0.103 | N | 0.344 | neutral | N | 0.494832318 | None | None | I |
T/V | 0.2999 | likely_benign | 0.3255 | benign | -0.012 | Destabilizing | 0.919 | D | 0.438 | neutral | None | None | None | None | I |
T/W | 0.8913 | likely_pathogenic | 0.8981 | pathogenic | -0.764 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | I |
T/Y | 0.6335 | likely_pathogenic | 0.6286 | pathogenic | -0.329 | Destabilizing | 0.996 | D | 0.683 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.