Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29299 | 88120;88121;88122 | chr2:178557367;178557366;178557365 | chr2:179422094;179422093;179422092 |
N2AB | 27658 | 83197;83198;83199 | chr2:178557367;178557366;178557365 | chr2:179422094;179422093;179422092 |
N2A | 26731 | 80416;80417;80418 | chr2:178557367;178557366;178557365 | chr2:179422094;179422093;179422092 |
N2B | 20234 | 60925;60926;60927 | chr2:178557367;178557366;178557365 | chr2:179422094;179422093;179422092 |
Novex-1 | 20359 | 61300;61301;61302 | chr2:178557367;178557366;178557365 | chr2:179422094;179422093;179422092 |
Novex-2 | 20426 | 61501;61502;61503 | chr2:178557367;178557366;178557365 | chr2:179422094;179422093;179422092 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1001499509 | None | 0.998 | N | 0.619 | 0.405 | 0.626601018324 | gnomAD-4.0.0 | 1.59097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85771E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4684 | ambiguous | 0.4437 | ambiguous | -1.786 | Destabilizing | 0.998 | D | 0.619 | neutral | N | 0.490569843 | None | None | N |
V/C | 0.8778 | likely_pathogenic | 0.8671 | pathogenic | -1.411 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/D | 0.9601 | likely_pathogenic | 0.9643 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.832 | deleterious | N | 0.482607548 | None | None | N |
V/E | 0.9322 | likely_pathogenic | 0.9286 | pathogenic | -1.634 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/F | 0.6696 | likely_pathogenic | 0.6387 | pathogenic | -0.983 | Destabilizing | 0.999 | D | 0.792 | deleterious | N | 0.487959465 | None | None | N |
V/G | 0.7241 | likely_pathogenic | 0.7367 | pathogenic | -2.352 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | D | 0.527970317 | None | None | N |
V/H | 0.9747 | likely_pathogenic | 0.9756 | pathogenic | -2.066 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/I | 0.1127 | likely_benign | 0.102 | benign | -0.214 | Destabilizing | 0.767 | D | 0.26 | neutral | N | 0.480368705 | None | None | N |
V/K | 0.9554 | likely_pathogenic | 0.9596 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/L | 0.5083 | ambiguous | 0.4573 | ambiguous | -0.214 | Destabilizing | 0.981 | D | 0.619 | neutral | N | 0.501682552 | None | None | N |
V/M | 0.4263 | ambiguous | 0.3802 | ambiguous | -0.35 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/N | 0.8876 | likely_pathogenic | 0.8862 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/P | 0.9662 | likely_pathogenic | 0.9734 | pathogenic | -0.709 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/Q | 0.9337 | likely_pathogenic | 0.9351 | pathogenic | -1.478 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.9477 | likely_pathogenic | 0.9545 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/S | 0.7497 | likely_pathogenic | 0.7498 | pathogenic | -2.414 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/T | 0.6202 | likely_pathogenic | 0.6076 | pathogenic | -2.011 | Highly Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
V/W | 0.9891 | likely_pathogenic | 0.989 | pathogenic | -1.43 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/Y | 0.9329 | likely_pathogenic | 0.9295 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.