Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29301 | 88126;88127;88128 | chr2:178557361;178557360;178557359 | chr2:179422088;179422087;179422086 |
N2AB | 27660 | 83203;83204;83205 | chr2:178557361;178557360;178557359 | chr2:179422088;179422087;179422086 |
N2A | 26733 | 80422;80423;80424 | chr2:178557361;178557360;178557359 | chr2:179422088;179422087;179422086 |
N2B | 20236 | 60931;60932;60933 | chr2:178557361;178557360;178557359 | chr2:179422088;179422087;179422086 |
Novex-1 | 20361 | 61306;61307;61308 | chr2:178557361;178557360;178557359 | chr2:179422088;179422087;179422086 |
Novex-2 | 20428 | 61507;61508;61509 | chr2:178557361;178557360;178557359 | chr2:179422088;179422087;179422086 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.669 | N | 0.419 | 0.177 | 0.362160248664 | gnomAD-4.0.0 | 1.36832E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79883E-06 | 0 | 0 |
T/K | rs780957474 | 0.092 | 0.801 | N | 0.379 | 0.256 | 0.3085936734 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/K | rs780957474 | 0.092 | 0.801 | N | 0.379 | 0.256 | 0.3085936734 | gnomAD-4.0.0 | 6.8416E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0606 | likely_benign | 0.0621 | benign | -0.254 | Destabilizing | 0.625 | D | 0.33 | neutral | N | 0.407484312 | None | None | N |
T/C | 0.3454 | ambiguous | 0.4006 | ambiguous | -0.355 | Destabilizing | 0.998 | D | 0.415 | neutral | None | None | None | None | N |
T/D | 0.2678 | likely_benign | 0.2669 | benign | 0.301 | Stabilizing | 0.728 | D | 0.385 | neutral | None | None | None | None | N |
T/E | 0.3086 | likely_benign | 0.3052 | benign | 0.242 | Stabilizing | 0.842 | D | 0.384 | neutral | None | None | None | None | N |
T/F | 0.3034 | likely_benign | 0.322 | benign | -0.782 | Destabilizing | 0.949 | D | 0.419 | neutral | None | None | None | None | N |
T/G | 0.1129 | likely_benign | 0.1198 | benign | -0.381 | Destabilizing | 0.728 | D | 0.379 | neutral | None | None | None | None | N |
T/H | 0.2008 | likely_benign | 0.223 | benign | -0.544 | Destabilizing | 0.974 | D | 0.409 | neutral | None | None | None | None | N |
T/I | 0.2947 | likely_benign | 0.3154 | benign | -0.041 | Destabilizing | 0.669 | D | 0.419 | neutral | N | 0.456662339 | None | None | N |
T/K | 0.2416 | likely_benign | 0.2564 | benign | -0.231 | Destabilizing | 0.801 | D | 0.379 | neutral | N | 0.36711777 | None | None | N |
T/L | 0.1273 | likely_benign | 0.1356 | benign | -0.041 | Destabilizing | 0.016 | N | 0.229 | neutral | None | None | None | None | N |
T/M | 0.1086 | likely_benign | 0.1125 | benign | -0.129 | Destabilizing | 0.949 | D | 0.412 | neutral | None | None | None | None | N |
T/N | 0.0709 | likely_benign | 0.0712 | benign | -0.114 | Destabilizing | 0.007 | N | 0.141 | neutral | None | None | None | None | N |
T/P | 0.1091 | likely_benign | 0.1271 | benign | -0.084 | Destabilizing | 0.989 | D | 0.427 | neutral | N | 0.370832866 | None | None | N |
T/Q | 0.214 | likely_benign | 0.2265 | benign | -0.263 | Destabilizing | 0.974 | D | 0.423 | neutral | None | None | None | None | N |
T/R | 0.2326 | likely_benign | 0.2456 | benign | 0.02 | Stabilizing | 0.934 | D | 0.423 | neutral | N | 0.363482819 | None | None | N |
T/S | 0.0695 | likely_benign | 0.0745 | benign | -0.324 | Destabilizing | 0.454 | N | 0.363 | neutral | N | 0.371870229 | None | None | N |
T/V | 0.1877 | likely_benign | 0.1988 | benign | -0.084 | Destabilizing | 0.728 | D | 0.321 | neutral | None | None | None | None | N |
T/W | 0.6487 | likely_pathogenic | 0.6781 | pathogenic | -0.841 | Destabilizing | 0.998 | D | 0.494 | neutral | None | None | None | None | N |
T/Y | 0.2924 | likely_benign | 0.3098 | benign | -0.514 | Destabilizing | 0.991 | D | 0.412 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.