Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2930688141;88142;88143 chr2:178557346;178557345;178557344chr2:179422073;179422072;179422071
N2AB2766583218;83219;83220 chr2:178557346;178557345;178557344chr2:179422073;179422072;179422071
N2A2673880437;80438;80439 chr2:178557346;178557345;178557344chr2:179422073;179422072;179422071
N2B2024160946;60947;60948 chr2:178557346;178557345;178557344chr2:179422073;179422072;179422071
Novex-12036661321;61322;61323 chr2:178557346;178557345;178557344chr2:179422073;179422072;179422071
Novex-22043361522;61523;61524 chr2:178557346;178557345;178557344chr2:179422073;179422072;179422071
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-101
  • Domain position: 70
  • Structural Position: 102
  • Q(SASA): 0.3576
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs551887772 -0.927 1.0 N 0.683 0.363 0.534140917371 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 1E-03 None None None 0 None
L/V None None 0.999 N 0.418 0.28 0.465549362696 gnomAD-4.0.0 1.59101E-06 None None None None I None 0 0 None 0 0 None 0 0 0 1.43271E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.7277 likely_pathogenic 0.768 pathogenic -1.74 Destabilizing 0.999 D 0.636 neutral None None None None I
L/C 0.7542 likely_pathogenic 0.7739 pathogenic -0.912 Destabilizing 1.0 D 0.666 neutral None None None None I
L/D 0.964 likely_pathogenic 0.9687 pathogenic -0.889 Destabilizing 1.0 D 0.699 prob.neutral None None None None I
L/E 0.8537 likely_pathogenic 0.8682 pathogenic -0.835 Destabilizing 1.0 D 0.697 prob.neutral None None None None I
L/F 0.4745 ambiguous 0.4875 ambiguous -1.131 Destabilizing 1.0 D 0.683 prob.neutral N 0.475229899 None None I
L/G 0.8814 likely_pathogenic 0.9046 pathogenic -2.117 Highly Destabilizing 1.0 D 0.697 prob.neutral None None None None I
L/H 0.637 likely_pathogenic 0.6672 pathogenic -1.318 Destabilizing 1.0 D 0.68 prob.neutral N 0.476690894 None None I
L/I 0.2255 likely_benign 0.2356 benign -0.754 Destabilizing 0.999 D 0.453 neutral N 0.436017708 None None I
L/K 0.7068 likely_pathogenic 0.7426 pathogenic -1.031 Destabilizing 1.0 D 0.689 prob.neutral None None None None I
L/M 0.1904 likely_benign 0.2068 benign -0.532 Destabilizing 1.0 D 0.687 prob.neutral None None None None I
L/N 0.6815 likely_pathogenic 0.7049 pathogenic -0.908 Destabilizing 1.0 D 0.696 prob.neutral None None None None I
L/P 0.9896 likely_pathogenic 0.9905 pathogenic -1.052 Destabilizing 1.0 D 0.696 prob.neutral N 0.481724359 None None I
L/Q 0.458 ambiguous 0.4962 ambiguous -1.003 Destabilizing 1.0 D 0.71 prob.delet. None None None None I
L/R 0.6077 likely_pathogenic 0.6439 pathogenic -0.548 Destabilizing 1.0 D 0.708 prob.delet. N 0.484403514 None None I
L/S 0.7838 likely_pathogenic 0.8227 pathogenic -1.628 Destabilizing 1.0 D 0.699 prob.neutral None None None None I
L/T 0.6919 likely_pathogenic 0.7363 pathogenic -1.449 Destabilizing 1.0 D 0.707 prob.neutral None None None None I
L/V 0.2805 likely_benign 0.3052 benign -1.052 Destabilizing 0.999 D 0.418 neutral N 0.459489213 None None I
L/W 0.7524 likely_pathogenic 0.7518 pathogenic -1.257 Destabilizing 1.0 D 0.67 neutral None None None None I
L/Y 0.7296 likely_pathogenic 0.7383 pathogenic -1.001 Destabilizing 1.0 D 0.698 prob.neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.