Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29306 | 88141;88142;88143 | chr2:178557346;178557345;178557344 | chr2:179422073;179422072;179422071 |
N2AB | 27665 | 83218;83219;83220 | chr2:178557346;178557345;178557344 | chr2:179422073;179422072;179422071 |
N2A | 26738 | 80437;80438;80439 | chr2:178557346;178557345;178557344 | chr2:179422073;179422072;179422071 |
N2B | 20241 | 60946;60947;60948 | chr2:178557346;178557345;178557344 | chr2:179422073;179422072;179422071 |
Novex-1 | 20366 | 61321;61322;61323 | chr2:178557346;178557345;178557344 | chr2:179422073;179422072;179422071 |
Novex-2 | 20433 | 61522;61523;61524 | chr2:178557346;178557345;178557344 | chr2:179422073;179422072;179422071 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs551887772 | -0.927 | 1.0 | N | 0.683 | 0.363 | 0.534140917371 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 1E-03 | None | None | None | 0 | None |
L/V | None | None | 0.999 | N | 0.418 | 0.28 | 0.465549362696 | gnomAD-4.0.0 | 1.59101E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7277 | likely_pathogenic | 0.768 | pathogenic | -1.74 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | I |
L/C | 0.7542 | likely_pathogenic | 0.7739 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | I |
L/D | 0.964 | likely_pathogenic | 0.9687 | pathogenic | -0.889 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
L/E | 0.8537 | likely_pathogenic | 0.8682 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
L/F | 0.4745 | ambiguous | 0.4875 | ambiguous | -1.131 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.475229899 | None | None | I |
L/G | 0.8814 | likely_pathogenic | 0.9046 | pathogenic | -2.117 | Highly Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
L/H | 0.637 | likely_pathogenic | 0.6672 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | N | 0.476690894 | None | None | I |
L/I | 0.2255 | likely_benign | 0.2356 | benign | -0.754 | Destabilizing | 0.999 | D | 0.453 | neutral | N | 0.436017708 | None | None | I |
L/K | 0.7068 | likely_pathogenic | 0.7426 | pathogenic | -1.031 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
L/M | 0.1904 | likely_benign | 0.2068 | benign | -0.532 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
L/N | 0.6815 | likely_pathogenic | 0.7049 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
L/P | 0.9896 | likely_pathogenic | 0.9905 | pathogenic | -1.052 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.481724359 | None | None | I |
L/Q | 0.458 | ambiguous | 0.4962 | ambiguous | -1.003 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
L/R | 0.6077 | likely_pathogenic | 0.6439 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | N | 0.484403514 | None | None | I |
L/S | 0.7838 | likely_pathogenic | 0.8227 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
L/T | 0.6919 | likely_pathogenic | 0.7363 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
L/V | 0.2805 | likely_benign | 0.3052 | benign | -1.052 | Destabilizing | 0.999 | D | 0.418 | neutral | N | 0.459489213 | None | None | I |
L/W | 0.7524 | likely_pathogenic | 0.7518 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
L/Y | 0.7296 | likely_pathogenic | 0.7383 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.