Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29315 | 88168;88169;88170 | chr2:178557319;178557318;178557317 | chr2:179422046;179422045;179422044 |
N2AB | 27674 | 83245;83246;83247 | chr2:178557319;178557318;178557317 | chr2:179422046;179422045;179422044 |
N2A | 26747 | 80464;80465;80466 | chr2:178557319;178557318;178557317 | chr2:179422046;179422045;179422044 |
N2B | 20250 | 60973;60974;60975 | chr2:178557319;178557318;178557317 | chr2:179422046;179422045;179422044 |
Novex-1 | 20375 | 61348;61349;61350 | chr2:178557319;178557318;178557317 | chr2:179422046;179422045;179422044 |
Novex-2 | 20442 | 61549;61550;61551 | chr2:178557319;178557318;178557317 | chr2:179422046;179422045;179422044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.639 | 0.334 | 0.279776271856 | gnomAD-4.0.0 | 1.59107E-06 | None | None | None | None | I | None | 5.65163E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 1.0 | N | 0.831 | 0.516 | 0.379366414296 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5515 | ambiguous | 0.5322 | ambiguous | -0.942 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | N | 0.471974215 | None | None | I |
E/C | 0.9405 | likely_pathogenic | 0.9432 | pathogenic | -0.73 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
E/D | 0.8571 | likely_pathogenic | 0.8604 | pathogenic | -1.588 | Destabilizing | 0.999 | D | 0.497 | neutral | D | 0.524035708 | None | None | I |
E/F | 0.9667 | likely_pathogenic | 0.9579 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | I |
E/G | 0.7761 | likely_pathogenic | 0.771 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.506096037 | None | None | I |
E/H | 0.9033 | likely_pathogenic | 0.8877 | pathogenic | -1.224 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
E/I | 0.5557 | ambiguous | 0.5249 | ambiguous | 0.089 | Stabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
E/K | 0.4711 | ambiguous | 0.4468 | ambiguous | -1.207 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.477431944 | None | None | I |
E/L | 0.7746 | likely_pathogenic | 0.7518 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
E/M | 0.6965 | likely_pathogenic | 0.6709 | pathogenic | 0.649 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
E/N | 0.8872 | likely_pathogenic | 0.8853 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/P | 0.9986 | likely_pathogenic | 0.9987 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
E/Q | 0.2232 | likely_benign | 0.2276 | benign | -1.292 | Destabilizing | 1.0 | D | 0.639 | neutral | N | 0.476671476 | None | None | I |
E/R | 0.6573 | likely_pathogenic | 0.6562 | pathogenic | -1.105 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
E/S | 0.7144 | likely_pathogenic | 0.6921 | pathogenic | -1.943 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | I |
E/T | 0.6669 | likely_pathogenic | 0.6345 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
E/V | 0.3508 | ambiguous | 0.3236 | benign | -0.234 | Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.47497038 | None | None | I |
E/W | 0.9921 | likely_pathogenic | 0.9906 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
E/Y | 0.9601 | likely_pathogenic | 0.9532 | pathogenic | -0.702 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.