Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29316 | 88171;88172;88173 | chr2:178557316;178557315;178557314 | chr2:179422043;179422042;179422041 |
N2AB | 27675 | 83248;83249;83250 | chr2:178557316;178557315;178557314 | chr2:179422043;179422042;179422041 |
N2A | 26748 | 80467;80468;80469 | chr2:178557316;178557315;178557314 | chr2:179422043;179422042;179422041 |
N2B | 20251 | 60976;60977;60978 | chr2:178557316;178557315;178557314 | chr2:179422043;179422042;179422041 |
Novex-1 | 20376 | 61351;61352;61353 | chr2:178557316;178557315;178557314 | chr2:179422043;179422042;179422041 |
Novex-2 | 20443 | 61552;61553;61554 | chr2:178557316;178557315;178557314 | chr2:179422043;179422042;179422041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs2154155539 | None | 0.999 | N | 0.58 | 0.525 | 0.332646915603 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs2154155539 | None | 0.999 | N | 0.58 | 0.525 | 0.332646915603 | gnomAD-4.0.0 | 6.56349E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46972E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9981 | likely_pathogenic | 0.9985 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/C | 0.9825 | likely_pathogenic | 0.9868 | pathogenic | -0.216 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/D | 0.9913 | likely_pathogenic | 0.9911 | pathogenic | -2.187 | Highly Destabilizing | 0.999 | D | 0.598 | neutral | D | 0.535879902 | None | None | N |
N/E | 0.9988 | likely_pathogenic | 0.9988 | pathogenic | -2.092 | Highly Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
N/F | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
N/G | 0.9944 | likely_pathogenic | 0.9948 | pathogenic | -0.276 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
N/H | 0.9904 | likely_pathogenic | 0.9916 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.543477225 | None | None | N |
N/I | 0.9956 | likely_pathogenic | 0.9956 | pathogenic | 0.553 | Stabilizing | 1.0 | D | 0.776 | deleterious | D | 0.555505094 | None | None | N |
N/K | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | 0.147 | Stabilizing | 1.0 | D | 0.741 | deleterious | D | 0.536133391 | None | None | N |
N/L | 0.9904 | likely_pathogenic | 0.9915 | pathogenic | 0.553 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/M | 0.9949 | likely_pathogenic | 0.9951 | pathogenic | 0.821 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
N/P | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
N/Q | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -0.979 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/R | 0.9986 | likely_pathogenic | 0.9989 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
N/S | 0.9575 | likely_pathogenic | 0.9681 | pathogenic | -0.531 | Destabilizing | 0.999 | D | 0.58 | neutral | N | 0.513430326 | None | None | N |
N/T | 0.9728 | likely_pathogenic | 0.9812 | pathogenic | -0.305 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.509374493 | None | None | N |
N/V | 0.9937 | likely_pathogenic | 0.9951 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
N/W | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
N/Y | 0.9946 | likely_pathogenic | 0.9951 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.792 | deleterious | D | 0.555251604 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.