Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29318 | 88177;88178;88179 | chr2:178557310;178557309;178557308 | chr2:179422037;179422036;179422035 |
N2AB | 27677 | 83254;83255;83256 | chr2:178557310;178557309;178557308 | chr2:179422037;179422036;179422035 |
N2A | 26750 | 80473;80474;80475 | chr2:178557310;178557309;178557308 | chr2:179422037;179422036;179422035 |
N2B | 20253 | 60982;60983;60984 | chr2:178557310;178557309;178557308 | chr2:179422037;179422036;179422035 |
Novex-1 | 20378 | 61357;61358;61359 | chr2:178557310;178557309;178557308 | chr2:179422037;179422036;179422035 |
Novex-2 | 20445 | 61558;61559;61560 | chr2:178557310;178557309;178557308 | chr2:179422037;179422036;179422035 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 1.0 | D | 0.821 | 0.461 | 0.466740653422 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7037 | likely_pathogenic | 0.7108 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
A/D | 0.9748 | likely_pathogenic | 0.9805 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.872 | deleterious | N | 0.498627299 | None | None | I |
A/E | 0.95 | likely_pathogenic | 0.9549 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
A/F | 0.8282 | likely_pathogenic | 0.8423 | pathogenic | -0.992 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
A/G | 0.459 | ambiguous | 0.54 | ambiguous | -0.259 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.483534784 | None | None | I |
A/H | 0.9413 | likely_pathogenic | 0.9563 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
A/I | 0.7036 | likely_pathogenic | 0.6902 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
A/K | 0.9665 | likely_pathogenic | 0.9759 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
A/L | 0.676 | likely_pathogenic | 0.694 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
A/M | 0.7254 | likely_pathogenic | 0.7344 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
A/N | 0.9157 | likely_pathogenic | 0.9351 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | I |
A/P | 0.9734 | likely_pathogenic | 0.9707 | pathogenic | -0.338 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.53002687 | None | None | I |
A/Q | 0.8943 | likely_pathogenic | 0.9195 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
A/R | 0.9053 | likely_pathogenic | 0.9268 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
A/S | 0.2432 | likely_benign | 0.2666 | benign | -0.399 | Destabilizing | 1.0 | D | 0.628 | neutral | N | 0.479637671 | None | None | I |
A/T | 0.5214 | ambiguous | 0.5036 | ambiguous | -0.505 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.517492023 | None | None | I |
A/V | 0.3373 | likely_benign | 0.33 | benign | -0.338 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.464916463 | None | None | I |
A/W | 0.9788 | likely_pathogenic | 0.9816 | pathogenic | -1.084 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
A/Y | 0.9227 | likely_pathogenic | 0.9366 | pathogenic | -0.75 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.