Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29319 | 88180;88181;88182 | chr2:178557307;178557306;178557305 | chr2:179422034;179422033;179422032 |
N2AB | 27678 | 83257;83258;83259 | chr2:178557307;178557306;178557305 | chr2:179422034;179422033;179422032 |
N2A | 26751 | 80476;80477;80478 | chr2:178557307;178557306;178557305 | chr2:179422034;179422033;179422032 |
N2B | 20254 | 60985;60986;60987 | chr2:178557307;178557306;178557305 | chr2:179422034;179422033;179422032 |
Novex-1 | 20379 | 61360;61361;61362 | chr2:178557307;178557306;178557305 | chr2:179422034;179422033;179422032 |
Novex-2 | 20446 | 61561;61562;61563 | chr2:178557307;178557306;178557305 | chr2:179422034;179422033;179422032 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs750942235 | -1.058 | 1.0 | D | 0.917 | 0.698 | 0.661092831861 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
G/E | rs750942235 | -1.058 | 1.0 | D | 0.917 | 0.698 | 0.661092831861 | gnomAD-4.0.0 | 1.36836E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79882E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8053 | likely_pathogenic | 0.813 | pathogenic | -0.584 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.55579608 | None | None | I |
G/C | 0.9236 | likely_pathogenic | 0.9359 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
G/D | 0.9622 | likely_pathogenic | 0.9718 | pathogenic | -1.175 | Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | I |
G/E | 0.9749 | likely_pathogenic | 0.9782 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.567152385 | None | None | I |
G/F | 0.9915 | likely_pathogenic | 0.993 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
G/H | 0.9781 | likely_pathogenic | 0.9877 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/I | 0.9896 | likely_pathogenic | 0.9915 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | I |
G/K | 0.9701 | likely_pathogenic | 0.9829 | pathogenic | -1.117 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | I |
G/L | 0.9841 | likely_pathogenic | 0.9879 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
G/M | 0.9877 | likely_pathogenic | 0.9904 | pathogenic | -0.502 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
G/N | 0.9604 | likely_pathogenic | 0.9771 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/P | 0.9985 | likely_pathogenic | 0.9991 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | I |
G/Q | 0.9649 | likely_pathogenic | 0.9764 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | I |
G/R | 0.9377 | likely_pathogenic | 0.9574 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.926 | deleterious | D | 0.556049569 | None | None | I |
G/S | 0.7032 | likely_pathogenic | 0.7649 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
G/T | 0.9275 | likely_pathogenic | 0.9481 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | I |
G/V | 0.9732 | likely_pathogenic | 0.978 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.897 | deleterious | D | 0.538198804 | None | None | I |
G/W | 0.9885 | likely_pathogenic | 0.9894 | pathogenic | -1.422 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
G/Y | 0.9863 | likely_pathogenic | 0.9899 | pathogenic | -1.103 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.