Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2932 | 9019;9020;9021 | chr2:178769787;178769786;178769785 | chr2:179634514;179634513;179634512 |
N2AB | 2932 | 9019;9020;9021 | chr2:178769787;178769786;178769785 | chr2:179634514;179634513;179634512 |
N2A | 2932 | 9019;9020;9021 | chr2:178769787;178769786;178769785 | chr2:179634514;179634513;179634512 |
N2B | 2886 | 8881;8882;8883 | chr2:178769787;178769786;178769785 | chr2:179634514;179634513;179634512 |
Novex-1 | 2886 | 8881;8882;8883 | chr2:178769787;178769786;178769785 | chr2:179634514;179634513;179634512 |
Novex-2 | 2886 | 8881;8882;8883 | chr2:178769787;178769786;178769785 | chr2:179634514;179634513;179634512 |
Novex-3 | 2932 | 9019;9020;9021 | chr2:178769787;178769786;178769785 | chr2:179634514;179634513;179634512 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1490705975 | 0.568 | 0.997 | N | 0.501 | 0.468 | 0.263612267334 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.83E-06 | 0 |
Q/R | rs1490705975 | 0.568 | 0.997 | N | 0.501 | 0.468 | 0.263612267334 | gnomAD-4.0.0 | 1.59048E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85652E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.5569 | ambiguous | 0.5034 | ambiguous | -0.049 | Destabilizing | 0.997 | D | 0.515 | neutral | None | None | None | None | N |
Q/C | 0.9698 | likely_pathogenic | 0.9494 | pathogenic | -0.019 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
Q/D | 0.7883 | likely_pathogenic | 0.7078 | pathogenic | 0.185 | Stabilizing | 0.997 | D | 0.497 | neutral | None | None | None | None | N |
Q/E | 0.1945 | likely_benign | 0.1451 | benign | 0.171 | Stabilizing | 0.992 | D | 0.413 | neutral | N | 0.444687768 | None | None | N |
Q/F | 0.9634 | likely_pathogenic | 0.9527 | pathogenic | -0.265 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
Q/G | 0.7333 | likely_pathogenic | 0.6703 | pathogenic | -0.228 | Destabilizing | 0.997 | D | 0.474 | neutral | None | None | None | None | N |
Q/H | 0.6666 | likely_pathogenic | 0.5866 | pathogenic | 0.005 | Stabilizing | 0.999 | D | 0.546 | neutral | N | 0.512119051 | None | None | N |
Q/I | 0.839 | likely_pathogenic | 0.8073 | pathogenic | 0.331 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
Q/K | 0.3179 | likely_benign | 0.2412 | benign | 0.159 | Stabilizing | 0.997 | D | 0.487 | neutral | N | 0.485115069 | None | None | N |
Q/L | 0.5157 | ambiguous | 0.4195 | ambiguous | 0.331 | Stabilizing | 0.997 | D | 0.474 | neutral | N | 0.510829366 | None | None | N |
Q/M | 0.7173 | likely_pathogenic | 0.6823 | pathogenic | 0.283 | Stabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
Q/N | 0.6168 | likely_pathogenic | 0.5573 | ambiguous | -0.336 | Destabilizing | 0.999 | D | 0.509 | neutral | None | None | None | None | N |
Q/P | 0.946 | likely_pathogenic | 0.8929 | pathogenic | 0.233 | Stabilizing | 0.999 | D | 0.547 | neutral | D | 0.583073558 | None | None | N |
Q/R | 0.3512 | ambiguous | 0.2775 | benign | 0.298 | Stabilizing | 0.997 | D | 0.501 | neutral | N | 0.505132299 | None | None | N |
Q/S | 0.5446 | ambiguous | 0.4986 | ambiguous | -0.301 | Destabilizing | 0.997 | D | 0.476 | neutral | None | None | None | None | N |
Q/T | 0.5428 | ambiguous | 0.4882 | ambiguous | -0.157 | Destabilizing | 0.999 | D | 0.516 | neutral | None | None | None | None | N |
Q/V | 0.6959 | likely_pathogenic | 0.6652 | pathogenic | 0.233 | Stabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | N |
Q/W | 0.9486 | likely_pathogenic | 0.9217 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.582 | neutral | None | None | None | None | N |
Q/Y | 0.9207 | likely_pathogenic | 0.886 | pathogenic | 0.004 | Stabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.