Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29320 | 88183;88184;88185 | chr2:178557304;178557303;178557302 | chr2:179422031;179422030;179422029 |
N2AB | 27679 | 83260;83261;83262 | chr2:178557304;178557303;178557302 | chr2:179422031;179422030;179422029 |
N2A | 26752 | 80479;80480;80481 | chr2:178557304;178557303;178557302 | chr2:179422031;179422030;179422029 |
N2B | 20255 | 60988;60989;60990 | chr2:178557304;178557303;178557302 | chr2:179422031;179422030;179422029 |
Novex-1 | 20380 | 61363;61364;61365 | chr2:178557304;178557303;178557302 | chr2:179422031;179422030;179422029 |
Novex-2 | 20447 | 61564;61565;61566 | chr2:178557304;178557303;178557302 | chr2:179422031;179422030;179422029 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs765724248 | -0.915 | None | N | 0.275 | 0.129 | 0.144782658237 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 0 | None | 4.97611E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs765724248 | -0.915 | None | N | 0.275 | 0.129 | 0.144782658237 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 2.88351E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs765724248 | -0.915 | None | N | 0.275 | 0.129 | 0.144782658237 | gnomAD-4.0.0 | 1.11535E-05 | None | None | None | None | I | None | 0 | 0 | None | 4.05405E-04 | 0 | None | 0 | 0 | 2.54262E-06 | 0 | 4.80338E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1493 | likely_benign | 0.1386 | benign | -1.347 | Destabilizing | 0.104 | N | 0.623 | neutral | N | 0.47661075 | None | None | I |
V/C | 0.5611 | ambiguous | 0.5451 | ambiguous | -1.013 | Destabilizing | 0.968 | D | 0.773 | deleterious | None | None | None | None | I |
V/D | 0.5778 | likely_pathogenic | 0.4934 | ambiguous | -0.808 | Destabilizing | 0.667 | D | 0.839 | deleterious | N | 0.521228318 | None | None | I |
V/E | 0.4242 | ambiguous | 0.3581 | ambiguous | -0.843 | Destabilizing | 0.726 | D | 0.833 | deleterious | None | None | None | None | I |
V/F | 0.1525 | likely_benign | 0.1309 | benign | -1.164 | Destabilizing | 0.497 | N | 0.789 | deleterious | N | 0.505336146 | None | None | I |
V/G | 0.2989 | likely_benign | 0.2693 | benign | -1.619 | Destabilizing | 0.667 | D | 0.827 | deleterious | N | 0.521921752 | None | None | I |
V/H | 0.591 | likely_pathogenic | 0.5262 | ambiguous | -0.999 | Destabilizing | 0.968 | D | 0.836 | deleterious | None | None | None | None | I |
V/I | 0.0556 | likely_benign | 0.057 | benign | -0.722 | Destabilizing | None | N | 0.275 | neutral | N | 0.397149888 | None | None | I |
V/K | 0.3606 | ambiguous | 0.317 | benign | -0.927 | Destabilizing | 0.726 | D | 0.831 | deleterious | None | None | None | None | I |
V/L | 0.1274 | likely_benign | 0.1235 | benign | -0.722 | Destabilizing | 0.009 | N | 0.439 | neutral | N | 0.423122981 | None | None | I |
V/M | 0.1112 | likely_benign | 0.1109 | benign | -0.598 | Destabilizing | 0.567 | D | 0.736 | prob.delet. | None | None | None | None | I |
V/N | 0.3327 | likely_benign | 0.2885 | benign | -0.683 | Destabilizing | 0.89 | D | 0.843 | deleterious | None | None | None | None | I |
V/P | 0.3668 | ambiguous | 0.3829 | ambiguous | -0.894 | Destabilizing | 0.89 | D | 0.837 | deleterious | None | None | None | None | I |
V/Q | 0.3728 | ambiguous | 0.3388 | benign | -0.905 | Destabilizing | 0.89 | D | 0.834 | deleterious | None | None | None | None | I |
V/R | 0.31 | likely_benign | 0.2573 | benign | -0.363 | Destabilizing | 0.726 | D | 0.843 | deleterious | None | None | None | None | I |
V/S | 0.2273 | likely_benign | 0.2002 | benign | -1.251 | Destabilizing | 0.726 | D | 0.794 | deleterious | None | None | None | None | I |
V/T | 0.1231 | likely_benign | 0.107 | benign | -1.17 | Destabilizing | 0.272 | N | 0.676 | prob.neutral | None | None | None | None | I |
V/W | 0.7285 | likely_pathogenic | 0.6755 | pathogenic | -1.226 | Destabilizing | 0.968 | D | 0.801 | deleterious | None | None | None | None | I |
V/Y | 0.4879 | ambiguous | 0.4607 | ambiguous | -0.956 | Destabilizing | 0.726 | D | 0.781 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.