Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2932088183;88184;88185 chr2:178557304;178557303;178557302chr2:179422031;179422030;179422029
N2AB2767983260;83261;83262 chr2:178557304;178557303;178557302chr2:179422031;179422030;179422029
N2A2675280479;80480;80481 chr2:178557304;178557303;178557302chr2:179422031;179422030;179422029
N2B2025560988;60989;60990 chr2:178557304;178557303;178557302chr2:179422031;179422030;179422029
Novex-12038061363;61364;61365 chr2:178557304;178557303;178557302chr2:179422031;179422030;179422029
Novex-22044761564;61565;61566 chr2:178557304;178557303;178557302chr2:179422031;179422030;179422029
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTT
  • RefSeq wild type template codon: CAA
  • Domain: Fn3-101
  • Domain position: 84
  • Structural Position: 117
  • Q(SASA): 0.2751
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/I rs765724248 -0.915 None N 0.275 0.129 0.144782658237 gnomAD-2.1.1 2.01E-05 None None None None I None 0 0 None 4.97611E-04 0 None 0 None 0 0 0
V/I rs765724248 -0.915 None N 0.275 0.129 0.144782658237 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 2.88351E-04 0 None 0 0 0 0 0
V/I rs765724248 -0.915 None N 0.275 0.129 0.144782658237 gnomAD-4.0.0 1.11535E-05 None None None None I None 0 0 None 4.05405E-04 0 None 0 0 2.54262E-06 0 4.80338E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.1493 likely_benign 0.1386 benign -1.347 Destabilizing 0.104 N 0.623 neutral N 0.47661075 None None I
V/C 0.5611 ambiguous 0.5451 ambiguous -1.013 Destabilizing 0.968 D 0.773 deleterious None None None None I
V/D 0.5778 likely_pathogenic 0.4934 ambiguous -0.808 Destabilizing 0.667 D 0.839 deleterious N 0.521228318 None None I
V/E 0.4242 ambiguous 0.3581 ambiguous -0.843 Destabilizing 0.726 D 0.833 deleterious None None None None I
V/F 0.1525 likely_benign 0.1309 benign -1.164 Destabilizing 0.497 N 0.789 deleterious N 0.505336146 None None I
V/G 0.2989 likely_benign 0.2693 benign -1.619 Destabilizing 0.667 D 0.827 deleterious N 0.521921752 None None I
V/H 0.591 likely_pathogenic 0.5262 ambiguous -0.999 Destabilizing 0.968 D 0.836 deleterious None None None None I
V/I 0.0556 likely_benign 0.057 benign -0.722 Destabilizing None N 0.275 neutral N 0.397149888 None None I
V/K 0.3606 ambiguous 0.317 benign -0.927 Destabilizing 0.726 D 0.831 deleterious None None None None I
V/L 0.1274 likely_benign 0.1235 benign -0.722 Destabilizing 0.009 N 0.439 neutral N 0.423122981 None None I
V/M 0.1112 likely_benign 0.1109 benign -0.598 Destabilizing 0.567 D 0.736 prob.delet. None None None None I
V/N 0.3327 likely_benign 0.2885 benign -0.683 Destabilizing 0.89 D 0.843 deleterious None None None None I
V/P 0.3668 ambiguous 0.3829 ambiguous -0.894 Destabilizing 0.89 D 0.837 deleterious None None None None I
V/Q 0.3728 ambiguous 0.3388 benign -0.905 Destabilizing 0.89 D 0.834 deleterious None None None None I
V/R 0.31 likely_benign 0.2573 benign -0.363 Destabilizing 0.726 D 0.843 deleterious None None None None I
V/S 0.2273 likely_benign 0.2002 benign -1.251 Destabilizing 0.726 D 0.794 deleterious None None None None I
V/T 0.1231 likely_benign 0.107 benign -1.17 Destabilizing 0.272 N 0.676 prob.neutral None None None None I
V/W 0.7285 likely_pathogenic 0.6755 pathogenic -1.226 Destabilizing 0.968 D 0.801 deleterious None None None None I
V/Y 0.4879 ambiguous 0.4607 ambiguous -0.956 Destabilizing 0.726 D 0.781 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.