Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29323 | 88192;88193;88194 | chr2:178557295;178557294;178557293 | chr2:179422022;179422021;179422020 |
N2AB | 27682 | 83269;83270;83271 | chr2:178557295;178557294;178557293 | chr2:179422022;179422021;179422020 |
N2A | 26755 | 80488;80489;80490 | chr2:178557295;178557294;178557293 | chr2:179422022;179422021;179422020 |
N2B | 20258 | 60997;60998;60999 | chr2:178557295;178557294;178557293 | chr2:179422022;179422021;179422020 |
Novex-1 | 20383 | 61372;61373;61374 | chr2:178557295;178557294;178557293 | chr2:179422022;179422021;179422020 |
Novex-2 | 20450 | 61573;61574;61575 | chr2:178557295;178557294;178557293 | chr2:179422022;179422021;179422020 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1371741615 | -1.452 | 0.012 | N | 0.396 | 0.141 | 0.200317383148 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
P/S | rs1371741615 | -1.452 | 0.012 | N | 0.396 | 0.141 | 0.200317383148 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85768E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0727 | likely_benign | 0.0681 | benign | -1.69 | Destabilizing | None | N | 0.263 | neutral | N | 0.478170975 | None | None | I |
P/C | 0.4443 | ambiguous | 0.4101 | ambiguous | -0.836 | Destabilizing | 0.356 | N | 0.562 | neutral | None | None | None | None | I |
P/D | 0.9246 | likely_pathogenic | 0.9096 | pathogenic | -1.627 | Destabilizing | 0.136 | N | 0.511 | neutral | None | None | None | None | I |
P/E | 0.7548 | likely_pathogenic | 0.7101 | pathogenic | -1.585 | Destabilizing | 0.072 | N | 0.475 | neutral | None | None | None | None | I |
P/F | 0.7008 | likely_pathogenic | 0.6744 | pathogenic | -1.224 | Destabilizing | None | N | 0.463 | neutral | None | None | None | None | I |
P/G | 0.4883 | ambiguous | 0.419 | ambiguous | -2.047 | Highly Destabilizing | 0.016 | N | 0.434 | neutral | None | None | None | None | I |
P/H | 0.603 | likely_pathogenic | 0.5838 | pathogenic | -1.651 | Destabilizing | 0.56 | D | 0.547 | neutral | N | 0.495549426 | None | None | I |
P/I | 0.5235 | ambiguous | 0.4618 | ambiguous | -0.781 | Destabilizing | None | N | 0.46 | neutral | None | None | None | None | I |
P/K | 0.7904 | likely_pathogenic | 0.7599 | pathogenic | -1.347 | Destabilizing | 0.072 | N | 0.477 | neutral | None | None | None | None | I |
P/L | 0.3189 | likely_benign | 0.2968 | benign | -0.781 | Destabilizing | None | N | 0.452 | neutral | N | 0.493014531 | None | None | I |
P/M | 0.4628 | ambiguous | 0.46 | ambiguous | -0.486 | Destabilizing | 0.12 | N | 0.595 | neutral | None | None | None | None | I |
P/N | 0.7856 | likely_pathogenic | 0.7545 | pathogenic | -1.148 | Destabilizing | 0.136 | N | 0.616 | neutral | None | None | None | None | I |
P/Q | 0.503 | ambiguous | 0.4573 | ambiguous | -1.274 | Destabilizing | 0.356 | N | 0.535 | neutral | None | None | None | None | I |
P/R | 0.6685 | likely_pathogenic | 0.6353 | pathogenic | -0.862 | Destabilizing | 0.055 | N | 0.596 | neutral | N | 0.506056357 | None | None | I |
P/S | 0.2742 | likely_benign | 0.2371 | benign | -1.667 | Destabilizing | 0.012 | N | 0.396 | neutral | N | 0.475924234 | None | None | I |
P/T | 0.2916 | likely_benign | 0.255 | benign | -1.522 | Destabilizing | 0.024 | N | 0.389 | neutral | N | 0.476684702 | None | None | I |
P/V | 0.3107 | likely_benign | 0.2771 | benign | -1.052 | Destabilizing | None | N | 0.377 | neutral | None | None | None | None | I |
P/W | 0.8758 | likely_pathogenic | 0.8653 | pathogenic | -1.511 | Destabilizing | 0.864 | D | 0.579 | neutral | None | None | None | None | I |
P/Y | 0.7291 | likely_pathogenic | 0.7114 | pathogenic | -1.208 | Destabilizing | 0.038 | N | 0.594 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.