Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29327 | 88204;88205;88206 | chr2:178557283;178557282;178557281 | chr2:179422010;179422009;179422008 |
N2AB | 27686 | 83281;83282;83283 | chr2:178557283;178557282;178557281 | chr2:179422010;179422009;179422008 |
N2A | 26759 | 80500;80501;80502 | chr2:178557283;178557282;178557281 | chr2:179422010;179422009;179422008 |
N2B | 20262 | 61009;61010;61011 | chr2:178557283;178557282;178557281 | chr2:179422010;179422009;179422008 |
Novex-1 | 20387 | 61384;61385;61386 | chr2:178557283;178557282;178557281 | chr2:179422010;179422009;179422008 |
Novex-2 | 20454 | 61585;61586;61587 | chr2:178557283;178557282;178557281 | chr2:179422010;179422009;179422008 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs369714676 | 0.23 | 0.994 | N | 0.673 | 0.476 | None | gnomAD-4.0.0 | 1.59115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77685E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2686 | likely_benign | 0.2967 | benign | -0.636 | Destabilizing | 0.595 | D | 0.473 | neutral | N | 0.503748498 | None | None | N |
S/C | 0.1897 | likely_benign | 0.2011 | benign | -0.555 | Destabilizing | 0.049 | N | 0.509 | neutral | N | 0.489811753 | None | None | N |
S/D | 0.9874 | likely_pathogenic | 0.9899 | pathogenic | -1.022 | Destabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | N |
S/E | 0.9931 | likely_pathogenic | 0.9952 | pathogenic | -0.924 | Destabilizing | 0.995 | D | 0.632 | neutral | None | None | None | None | N |
S/F | 0.9788 | likely_pathogenic | 0.9859 | pathogenic | -0.413 | Destabilizing | 0.994 | D | 0.683 | prob.neutral | D | 0.534387601 | None | None | N |
S/G | 0.3507 | ambiguous | 0.3876 | ambiguous | -0.99 | Destabilizing | 0.95 | D | 0.591 | neutral | None | None | None | None | N |
S/H | 0.9852 | likely_pathogenic | 0.9872 | pathogenic | -1.492 | Destabilizing | 0.999 | D | 0.652 | prob.neutral | None | None | None | None | N |
S/I | 0.9214 | likely_pathogenic | 0.9499 | pathogenic | 0.227 | Stabilizing | 0.971 | D | 0.669 | prob.neutral | None | None | None | None | N |
S/K | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -0.837 | Destabilizing | 0.995 | D | 0.62 | neutral | None | None | None | None | N |
S/L | 0.7224 | likely_pathogenic | 0.7852 | pathogenic | 0.227 | Stabilizing | 0.825 | D | 0.697 | prob.delet. | None | None | None | None | N |
S/M | 0.8099 | likely_pathogenic | 0.8588 | pathogenic | 0.277 | Stabilizing | 0.999 | D | 0.649 | prob.neutral | None | None | None | None | N |
S/N | 0.9297 | likely_pathogenic | 0.9401 | pathogenic | -1.099 | Destabilizing | 0.995 | D | 0.643 | neutral | None | None | None | None | N |
S/P | 0.9898 | likely_pathogenic | 0.9916 | pathogenic | -0.024 | Destabilizing | 0.994 | D | 0.673 | prob.neutral | N | 0.517043815 | None | None | N |
S/Q | 0.9881 | likely_pathogenic | 0.9904 | pathogenic | -1.02 | Destabilizing | 0.995 | D | 0.663 | prob.neutral | None | None | None | None | N |
S/R | 0.9972 | likely_pathogenic | 0.9977 | pathogenic | -0.986 | Destabilizing | 0.995 | D | 0.666 | prob.neutral | None | None | None | None | N |
S/T | 0.1836 | likely_benign | 0.2076 | benign | -0.883 | Destabilizing | 0.877 | D | 0.623 | neutral | N | 0.467197594 | None | None | N |
S/V | 0.7705 | likely_pathogenic | 0.8382 | pathogenic | -0.024 | Destabilizing | 0.971 | D | 0.684 | prob.delet. | None | None | None | None | N |
S/W | 0.9916 | likely_pathogenic | 0.9938 | pathogenic | -0.585 | Destabilizing | 0.999 | D | 0.691 | prob.delet. | None | None | None | None | N |
S/Y | 0.9846 | likely_pathogenic | 0.989 | pathogenic | -0.246 | Destabilizing | 0.994 | D | 0.677 | prob.neutral | D | 0.522866712 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.