Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29331 | 88216;88217;88218 | chr2:178557271;178557270;178557269 | chr2:179421998;179421997;179421996 |
N2AB | 27690 | 83293;83294;83295 | chr2:178557271;178557270;178557269 | chr2:179421998;179421997;179421996 |
N2A | 26763 | 80512;80513;80514 | chr2:178557271;178557270;178557269 | chr2:179421998;179421997;179421996 |
N2B | 20266 | 61021;61022;61023 | chr2:178557271;178557270;178557269 | chr2:179421998;179421997;179421996 |
Novex-1 | 20391 | 61396;61397;61398 | chr2:178557271;178557270;178557269 | chr2:179421998;179421997;179421996 |
Novex-2 | 20458 | 61597;61598;61599 | chr2:178557271;178557270;178557269 | chr2:179421998;179421997;179421996 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.999 | N | 0.682 | 0.157 | 0.429091045357 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6007 | likely_pathogenic | 0.582 | pathogenic | -1.118 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
L/C | 0.7699 | likely_pathogenic | 0.7626 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/D | 0.9665 | likely_pathogenic | 0.9581 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/E | 0.8267 | likely_pathogenic | 0.7961 | pathogenic | -0.187 | Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | N |
L/F | 0.3592 | ambiguous | 0.3182 | benign | -0.597 | Destabilizing | 0.999 | D | 0.721 | deleterious | N | 0.482960719 | None | None | N |
L/G | 0.9126 | likely_pathogenic | 0.9088 | pathogenic | -1.411 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.6669 | likely_pathogenic | 0.6322 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
L/I | 0.1746 | likely_benign | 0.1879 | benign | -0.402 | Destabilizing | 0.998 | D | 0.655 | prob.neutral | None | None | None | None | N |
L/K | 0.6698 | likely_pathogenic | 0.6481 | pathogenic | -0.72 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
L/M | 0.1915 | likely_benign | 0.1959 | benign | -0.555 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.500103685 | None | None | N |
L/N | 0.8413 | likely_pathogenic | 0.8158 | pathogenic | -0.729 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/P | 0.6324 | likely_pathogenic | 0.6488 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/Q | 0.5127 | ambiguous | 0.4841 | ambiguous | -0.801 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/R | 0.5558 | ambiguous | 0.5365 | ambiguous | -0.221 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
L/S | 0.7895 | likely_pathogenic | 0.7559 | pathogenic | -1.366 | Destabilizing | 0.999 | D | 0.84 | deleterious | N | 0.479824413 | None | None | N |
L/T | 0.5569 | ambiguous | 0.548 | ambiguous | -1.22 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
L/V | 0.1749 | likely_benign | 0.1889 | benign | -0.608 | Destabilizing | 0.997 | D | 0.738 | deleterious | N | 0.391069278 | None | None | N |
L/W | 0.5838 | likely_pathogenic | 0.5798 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.731 | deleterious | N | 0.485279076 | None | None | N |
L/Y | 0.6809 | likely_pathogenic | 0.6542 | pathogenic | -0.414 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.