Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29335 | 88228;88229;88230 | chr2:178557259;178557258;178557257 | chr2:179421986;179421985;179421984 |
N2AB | 27694 | 83305;83306;83307 | chr2:178557259;178557258;178557257 | chr2:179421986;179421985;179421984 |
N2A | 26767 | 80524;80525;80526 | chr2:178557259;178557258;178557257 | chr2:179421986;179421985;179421984 |
N2B | 20270 | 61033;61034;61035 | chr2:178557259;178557258;178557257 | chr2:179421986;179421985;179421984 |
Novex-1 | 20395 | 61408;61409;61410 | chr2:178557259;178557258;178557257 | chr2:179421986;179421985;179421984 |
Novex-2 | 20462 | 61609;61610;61611 | chr2:178557259;178557258;178557257 | chr2:179421986;179421985;179421984 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.999 | N | 0.713 | 0.358 | 0.344483371355 | gnomAD-4.0.0 | 2.05262E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52411E-05 | None | 0 | 0 | 1.79885E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5618 | ambiguous | 0.5557 | ambiguous | -0.809 | Destabilizing | 1.0 | D | 0.673 | prob.neutral | None | None | None | None | I |
A/D | 0.5562 | ambiguous | 0.484 | ambiguous | 0.143 | Stabilizing | 0.997 | D | 0.824 | deleterious | N | 0.480797487 | None | None | I |
A/E | 0.5003 | ambiguous | 0.4436 | ambiguous | 0.008 | Stabilizing | 0.998 | D | 0.669 | prob.neutral | None | None | None | None | I |
A/F | 0.563 | ambiguous | 0.5204 | ambiguous | -0.777 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
A/G | 0.225 | likely_benign | 0.2198 | benign | -0.281 | Destabilizing | 0.991 | D | 0.566 | neutral | N | 0.480624129 | None | None | I |
A/H | 0.6353 | likely_pathogenic | 0.5953 | pathogenic | -0.276 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
A/I | 0.3753 | ambiguous | 0.3515 | ambiguous | -0.294 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
A/K | 0.7031 | likely_pathogenic | 0.6423 | pathogenic | -0.35 | Destabilizing | 0.998 | D | 0.697 | prob.delet. | None | None | None | None | I |
A/L | 0.2817 | likely_benign | 0.2665 | benign | -0.294 | Destabilizing | 0.997 | D | 0.77 | deleterious | None | None | None | None | I |
A/M | 0.3474 | ambiguous | 0.3417 | ambiguous | -0.442 | Destabilizing | 1.0 | D | 0.689 | prob.delet. | None | None | None | None | I |
A/N | 0.365 | ambiguous | 0.3335 | benign | -0.107 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | I |
A/P | 0.1964 | likely_benign | 0.1987 | benign | -0.242 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | N | 0.295206451 | None | None | I |
A/Q | 0.4763 | ambiguous | 0.4423 | ambiguous | -0.308 | Destabilizing | 0.999 | D | 0.699 | prob.delet. | None | None | None | None | I |
A/R | 0.618 | likely_pathogenic | 0.5543 | ambiguous | -0.028 | Destabilizing | 0.999 | D | 0.699 | prob.delet. | None | None | None | None | I |
A/S | 0.1106 | likely_benign | 0.1114 | benign | -0.403 | Destabilizing | 0.911 | D | 0.27 | neutral | N | 0.432062178 | None | None | I |
A/T | 0.1242 | likely_benign | 0.1274 | benign | -0.442 | Destabilizing | 0.983 | D | 0.699 | prob.delet. | N | 0.479930696 | None | None | I |
A/V | 0.1932 | likely_benign | 0.184 | benign | -0.242 | Destabilizing | 0.996 | D | 0.73 | deleterious | N | 0.424458628 | None | None | I |
A/W | 0.9054 | likely_pathogenic | 0.8849 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
A/Y | 0.6759 | likely_pathogenic | 0.6378 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.