Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2934 | 9025;9026;9027 | chr2:178769781;178769780;178769779 | chr2:179634508;179634507;179634506 |
N2AB | 2934 | 9025;9026;9027 | chr2:178769781;178769780;178769779 | chr2:179634508;179634507;179634506 |
N2A | 2934 | 9025;9026;9027 | chr2:178769781;178769780;178769779 | chr2:179634508;179634507;179634506 |
N2B | 2888 | 8887;8888;8889 | chr2:178769781;178769780;178769779 | chr2:179634508;179634507;179634506 |
Novex-1 | 2888 | 8887;8888;8889 | chr2:178769781;178769780;178769779 | chr2:179634508;179634507;179634506 |
Novex-2 | 2888 | 8887;8888;8889 | chr2:178769781;178769780;178769779 | chr2:179634508;179634507;179634506 |
Novex-3 | 2934 | 9025;9026;9027 | chr2:178769781;178769780;178769779 | chr2:179634508;179634507;179634506 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs2091195170 | None | 0.64 | N | 0.229 | 0.341 | 0.273070737957 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9712 | likely_pathogenic | 0.9207 | pathogenic | -0.799 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
K/C | 0.9643 | likely_pathogenic | 0.9309 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/D | 0.9881 | likely_pathogenic | 0.9605 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/E | 0.9512 | likely_pathogenic | 0.8416 | pathogenic | 0.02 | Stabilizing | 0.996 | D | 0.568 | neutral | N | 0.518150283 | None | None | N |
K/F | 0.9923 | likely_pathogenic | 0.9833 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
K/G | 0.9755 | likely_pathogenic | 0.9307 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/H | 0.8363 | likely_pathogenic | 0.737 | pathogenic | -1.412 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/I | 0.9609 | likely_pathogenic | 0.9095 | pathogenic | 0.27 | Stabilizing | 1.0 | D | 0.761 | deleterious | D | 0.590853903 | None | None | N |
K/L | 0.9061 | likely_pathogenic | 0.8325 | pathogenic | 0.27 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/M | 0.8408 | likely_pathogenic | 0.703 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/N | 0.9357 | likely_pathogenic | 0.8388 | pathogenic | -0.68 | Destabilizing | 0.999 | D | 0.657 | neutral | N | 0.513826528 | None | None | N |
K/P | 0.9818 | likely_pathogenic | 0.9609 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/Q | 0.7439 | likely_pathogenic | 0.5423 | ambiguous | -0.661 | Destabilizing | 0.999 | D | 0.661 | neutral | N | 0.516935427 | None | None | N |
K/R | 0.1935 | likely_benign | 0.1481 | benign | -0.661 | Destabilizing | 0.64 | D | 0.229 | neutral | N | 0.467651666 | None | None | N |
K/S | 0.9744 | likely_pathogenic | 0.9199 | pathogenic | -1.396 | Destabilizing | 0.998 | D | 0.606 | neutral | None | None | None | None | N |
K/T | 0.889 | likely_pathogenic | 0.725 | pathogenic | -1.015 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | N | 0.507813405 | None | None | N |
K/V | 0.9521 | likely_pathogenic | 0.8926 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/W | 0.9905 | likely_pathogenic | 0.9797 | pathogenic | -0.183 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Y | 0.9665 | likely_pathogenic | 0.9425 | pathogenic | 0.099 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.