Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29349 | 88270;88271;88272 | chr2:178557109;178557108;178557107 | chr2:179421836;179421835;179421834 |
N2AB | 27708 | 83347;83348;83349 | chr2:178557109;178557108;178557107 | chr2:179421836;179421835;179421834 |
N2A | 26781 | 80566;80567;80568 | chr2:178557109;178557108;178557107 | chr2:179421836;179421835;179421834 |
N2B | 20284 | 61075;61076;61077 | chr2:178557109;178557108;178557107 | chr2:179421836;179421835;179421834 |
Novex-1 | 20409 | 61450;61451;61452 | chr2:178557109;178557108;178557107 | chr2:179421836;179421835;179421834 |
Novex-2 | 20476 | 61651;61652;61653 | chr2:178557109;178557108;178557107 | chr2:179421836;179421835;179421834 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs748102856 | 0.051 | 1.0 | N | 0.723 | 0.256 | 0.206339911435 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
K/N | rs748102856 | 0.051 | 1.0 | N | 0.723 | 0.256 | 0.206339911435 | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | N | None | 2.98721E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15985E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6789 | likely_pathogenic | 0.6053 | pathogenic | -0.179 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
K/C | 0.8793 | likely_pathogenic | 0.8529 | pathogenic | -0.228 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/D | 0.8952 | likely_pathogenic | 0.8755 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
K/E | 0.4921 | ambiguous | 0.4012 | ambiguous | -0.308 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.495255225 | None | None | N |
K/F | 0.9745 | likely_pathogenic | 0.9625 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
K/G | 0.6665 | likely_pathogenic | 0.6087 | pathogenic | -0.397 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/H | 0.661 | likely_pathogenic | 0.6048 | pathogenic | -0.915 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/I | 0.8563 | likely_pathogenic | 0.8014 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/L | 0.7877 | likely_pathogenic | 0.7395 | pathogenic | 0.323 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/M | 0.6784 | likely_pathogenic | 0.6009 | pathogenic | 0.514 | Stabilizing | 1.0 | D | 0.6 | neutral | N | 0.505869001 | None | None | N |
K/N | 0.813 | likely_pathogenic | 0.77 | pathogenic | 0.093 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.508397881 | None | None | N |
K/P | 0.8419 | likely_pathogenic | 0.8159 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/Q | 0.2823 | likely_benign | 0.2264 | benign | -0.238 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.467823612 | None | None | N |
K/R | 0.0824 | likely_benign | 0.0755 | benign | -0.021 | Destabilizing | 0.999 | D | 0.532 | neutral | N | 0.420202893 | None | None | N |
K/S | 0.7405 | likely_pathogenic | 0.6803 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
K/T | 0.6191 | likely_pathogenic | 0.5457 | ambiguous | -0.27 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.509859319 | None | None | N |
K/V | 0.7806 | likely_pathogenic | 0.7209 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/W | 0.9512 | likely_pathogenic | 0.9332 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
K/Y | 0.9151 | likely_pathogenic | 0.8924 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.