Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29350 | 88273;88274;88275 | chr2:178557106;178557105;178557104 | chr2:179421833;179421832;179421831 |
N2AB | 27709 | 83350;83351;83352 | chr2:178557106;178557105;178557104 | chr2:179421833;179421832;179421831 |
N2A | 26782 | 80569;80570;80571 | chr2:178557106;178557105;178557104 | chr2:179421833;179421832;179421831 |
N2B | 20285 | 61078;61079;61080 | chr2:178557106;178557105;178557104 | chr2:179421833;179421832;179421831 |
Novex-1 | 20410 | 61453;61454;61455 | chr2:178557106;178557105;178557104 | chr2:179421833;179421832;179421831 |
Novex-2 | 20477 | 61654;61655;61656 | chr2:178557106;178557105;178557104 | chr2:179421833;179421832;179421831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs1218350204 | None | 0.001 | N | 0.069 | 0.091 | 0.184867976434 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/T | rs1218350204 | None | 0.001 | N | 0.069 | 0.091 | 0.184867976434 | gnomAD-4.0.0 | 6.57298E-06 | None | None | None | None | N | None | 2.41231E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2714 | likely_benign | 0.2244 | benign | -0.646 | Destabilizing | 0.116 | N | 0.341 | neutral | None | None | None | None | N |
N/C | 0.3437 | ambiguous | 0.3067 | benign | 0.179 | Stabilizing | 0.944 | D | 0.399 | neutral | None | None | None | None | N |
N/D | 0.1536 | likely_benign | 0.1332 | benign | -0.559 | Destabilizing | 0.09 | N | 0.309 | neutral | N | 0.456200979 | None | None | N |
N/E | 0.4328 | ambiguous | 0.36 | ambiguous | -0.583 | Destabilizing | 0.002 | N | 0.125 | neutral | None | None | None | None | N |
N/F | 0.5656 | likely_pathogenic | 0.451 | ambiguous | -1.071 | Destabilizing | 0.818 | D | 0.421 | neutral | None | None | None | None | N |
N/G | 0.3244 | likely_benign | 0.2903 | benign | -0.815 | Destabilizing | 0.207 | N | 0.279 | neutral | None | None | None | None | N |
N/H | 0.1326 | likely_benign | 0.1203 | benign | -0.926 | Destabilizing | 0.773 | D | 0.375 | neutral | N | 0.471852991 | None | None | N |
N/I | 0.3565 | ambiguous | 0.2902 | benign | -0.276 | Destabilizing | 0.457 | N | 0.431 | neutral | N | 0.512011521 | None | None | N |
N/K | 0.3925 | ambiguous | 0.3155 | benign | 0.059 | Stabilizing | 0.193 | N | 0.246 | neutral | N | 0.514153204 | None | None | N |
N/L | 0.3357 | likely_benign | 0.277 | benign | -0.276 | Destabilizing | 0.241 | N | 0.407 | neutral | None | None | None | None | N |
N/M | 0.3496 | ambiguous | 0.294 | benign | 0.45 | Stabilizing | 0.944 | D | 0.371 | neutral | None | None | None | None | N |
N/P | 0.8955 | likely_pathogenic | 0.8708 | pathogenic | -0.375 | Destabilizing | 0.818 | D | 0.401 | neutral | None | None | None | None | N |
N/Q | 0.3663 | ambiguous | 0.3118 | benign | -0.676 | Destabilizing | 0.241 | N | 0.368 | neutral | None | None | None | None | N |
N/R | 0.4504 | ambiguous | 0.3588 | ambiguous | 0.238 | Stabilizing | 0.388 | N | 0.361 | neutral | None | None | None | None | N |
N/S | 0.0929 | likely_benign | 0.0914 | benign | -0.303 | Destabilizing | 0.018 | N | 0.071 | neutral | N | 0.445194551 | None | None | N |
N/T | 0.112 | likely_benign | 0.1005 | benign | -0.19 | Destabilizing | 0.001 | N | 0.069 | neutral | N | 0.44018859 | None | None | N |
N/V | 0.3394 | likely_benign | 0.2832 | benign | -0.375 | Destabilizing | 0.241 | N | 0.401 | neutral | None | None | None | None | N |
N/W | 0.804 | likely_pathogenic | 0.738 | pathogenic | -0.948 | Destabilizing | 0.981 | D | 0.512 | neutral | None | None | None | None | N |
N/Y | 0.1717 | likely_benign | 0.1443 | benign | -0.682 | Destabilizing | 0.773 | D | 0.399 | neutral | N | 0.505263571 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.