Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29352 | 88279;88280;88281 | chr2:178557100;178557099;178557098 | chr2:179421827;179421826;179421825 |
N2AB | 27711 | 83356;83357;83358 | chr2:178557100;178557099;178557098 | chr2:179421827;179421826;179421825 |
N2A | 26784 | 80575;80576;80577 | chr2:178557100;178557099;178557098 | chr2:179421827;179421826;179421825 |
N2B | 20287 | 61084;61085;61086 | chr2:178557100;178557099;178557098 | chr2:179421827;179421826;179421825 |
Novex-1 | 20412 | 61459;61460;61461 | chr2:178557100;178557099;178557098 | chr2:179421827;179421826;179421825 |
Novex-2 | 20479 | 61660;61661;61662 | chr2:178557100;178557099;178557098 | chr2:179421827;179421826;179421825 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.176 | 0.086 | 0.199424873507 | gnomAD-4.0.0 | 6.84282E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99486E-07 | 0 | 0 |
V/L | None | None | None | N | 0.303 | 0.233 | 0.183819452728 | gnomAD-4.0.0 | 6.84282E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99486E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4786 | ambiguous | 0.3391 | benign | -2.078 | Highly Destabilizing | None | N | 0.357 | neutral | N | 0.455024232 | None | None | N |
V/C | 0.8671 | likely_pathogenic | 0.82 | pathogenic | -2.049 | Highly Destabilizing | 0.824 | D | 0.765 | deleterious | None | None | None | None | N |
V/D | 0.9939 | likely_pathogenic | 0.9908 | pathogenic | -2.473 | Highly Destabilizing | 0.317 | N | 0.813 | deleterious | D | 0.542372864 | None | None | N |
V/E | 0.9847 | likely_pathogenic | 0.9776 | pathogenic | -2.159 | Highly Destabilizing | 0.38 | N | 0.791 | deleterious | None | None | None | None | N |
V/F | 0.6401 | likely_pathogenic | 0.5356 | ambiguous | -1.292 | Destabilizing | 0.317 | N | 0.809 | deleterious | N | 0.51460737 | None | None | N |
V/G | 0.8115 | likely_pathogenic | 0.7277 | pathogenic | -2.702 | Highly Destabilizing | 0.062 | N | 0.759 | deleterious | N | 0.515874818 | None | None | N |
V/H | 0.9922 | likely_pathogenic | 0.9884 | pathogenic | -2.643 | Highly Destabilizing | 0.935 | D | 0.775 | deleterious | None | None | None | None | N |
V/I | 0.0828 | likely_benign | 0.0818 | benign | -0.281 | Destabilizing | None | N | 0.176 | neutral | N | 0.478565259 | None | None | N |
V/K | 0.9853 | likely_pathogenic | 0.9815 | pathogenic | -1.582 | Destabilizing | 0.38 | N | 0.79 | deleterious | None | None | None | None | N |
V/L | 0.3562 | ambiguous | 0.2894 | benign | -0.281 | Destabilizing | None | N | 0.303 | neutral | N | 0.46511309 | None | None | N |
V/M | 0.3933 | ambiguous | 0.3175 | benign | -0.75 | Destabilizing | 0.38 | N | 0.619 | neutral | None | None | None | None | N |
V/N | 0.9773 | likely_pathogenic | 0.9644 | pathogenic | -2.18 | Highly Destabilizing | 0.555 | D | 0.809 | deleterious | None | None | None | None | N |
V/P | 0.9908 | likely_pathogenic | 0.9866 | pathogenic | -0.858 | Destabilizing | 0.38 | N | 0.807 | deleterious | None | None | None | None | N |
V/Q | 0.9753 | likely_pathogenic | 0.966 | pathogenic | -1.805 | Destabilizing | 0.555 | D | 0.774 | deleterious | None | None | None | None | N |
V/R | 0.9694 | likely_pathogenic | 0.9611 | pathogenic | -1.805 | Destabilizing | 0.38 | N | 0.813 | deleterious | None | None | None | None | N |
V/S | 0.8743 | likely_pathogenic | 0.803 | pathogenic | -2.862 | Highly Destabilizing | 0.081 | N | 0.764 | deleterious | None | None | None | None | N |
V/T | 0.7532 | likely_pathogenic | 0.6547 | pathogenic | -2.36 | Highly Destabilizing | 0.081 | N | 0.659 | neutral | None | None | None | None | N |
V/W | 0.9942 | likely_pathogenic | 0.9899 | pathogenic | -1.717 | Destabilizing | 0.935 | D | 0.769 | deleterious | None | None | None | None | N |
V/Y | 0.9619 | likely_pathogenic | 0.943 | pathogenic | -1.366 | Destabilizing | 0.555 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.