Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29354 | 88285;88286;88287 | chr2:178557094;178557093;178557092 | chr2:179421821;179421820;179421819 |
N2AB | 27713 | 83362;83363;83364 | chr2:178557094;178557093;178557092 | chr2:179421821;179421820;179421819 |
N2A | 26786 | 80581;80582;80583 | chr2:178557094;178557093;178557092 | chr2:179421821;179421820;179421819 |
N2B | 20289 | 61090;61091;61092 | chr2:178557094;178557093;178557092 | chr2:179421821;179421820;179421819 |
Novex-1 | 20414 | 61465;61466;61467 | chr2:178557094;178557093;178557092 | chr2:179421821;179421820;179421819 |
Novex-2 | 20481 | 61666;61667;61668 | chr2:178557094;178557093;178557092 | chr2:179421821;179421820;179421819 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.989 | N | 0.654 | 0.316 | 0.372087925617 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.91 | likely_pathogenic | 0.8757 | pathogenic | -2.378 | Highly Destabilizing | 0.983 | D | 0.706 | prob.neutral | None | None | None | None | N |
L/C | 0.8438 | likely_pathogenic | 0.8048 | pathogenic | -1.26 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -2.924 | Highly Destabilizing | 0.99 | D | 0.901 | deleterious | None | None | None | None | N |
L/E | 0.9956 | likely_pathogenic | 0.9941 | pathogenic | -2.587 | Highly Destabilizing | 0.995 | D | 0.903 | deleterious | None | None | None | None | N |
L/F | 0.4845 | ambiguous | 0.3863 | ambiguous | -1.417 | Destabilizing | 0.999 | D | 0.747 | deleterious | D | 0.537864457 | None | None | N |
L/G | 0.9892 | likely_pathogenic | 0.9835 | pathogenic | -2.982 | Highly Destabilizing | 0.99 | D | 0.865 | deleterious | None | None | None | None | N |
L/H | 0.9836 | likely_pathogenic | 0.9793 | pathogenic | -2.911 | Highly Destabilizing | 0.999 | D | 0.915 | deleterious | D | 0.562262589 | None | None | N |
L/I | 0.0959 | likely_benign | 0.0824 | benign | -0.545 | Destabilizing | 0.996 | D | 0.635 | neutral | N | 0.511014112 | None | None | N |
L/K | 0.9902 | likely_pathogenic | 0.9892 | pathogenic | -1.631 | Destabilizing | 0.995 | D | 0.865 | deleterious | None | None | None | None | N |
L/M | 0.2501 | likely_benign | 0.2197 | benign | -0.724 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/N | 0.9951 | likely_pathogenic | 0.9936 | pathogenic | -2.43 | Highly Destabilizing | 0.289 | N | 0.758 | deleterious | None | None | None | None | N |
L/P | 0.9956 | likely_pathogenic | 0.9941 | pathogenic | -1.15 | Destabilizing | 0.999 | D | 0.917 | deleterious | D | 0.562009099 | None | None | N |
L/Q | 0.9785 | likely_pathogenic | 0.9734 | pathogenic | -1.96 | Destabilizing | 0.998 | D | 0.896 | deleterious | None | None | None | None | N |
L/R | 0.9819 | likely_pathogenic | 0.9771 | pathogenic | -2.004 | Highly Destabilizing | 0.993 | D | 0.89 | deleterious | D | 0.562009099 | None | None | N |
L/S | 0.9878 | likely_pathogenic | 0.9816 | pathogenic | -2.856 | Highly Destabilizing | 0.99 | D | 0.832 | deleterious | None | None | None | None | N |
L/T | 0.941 | likely_pathogenic | 0.9219 | pathogenic | -2.346 | Highly Destabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | N |
L/V | 0.1247 | likely_benign | 0.1062 | benign | -1.15 | Destabilizing | 0.989 | D | 0.654 | neutral | N | 0.480262192 | None | None | N |
L/W | 0.9522 | likely_pathogenic | 0.9322 | pathogenic | -1.732 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/Y | 0.9418 | likely_pathogenic | 0.9214 | pathogenic | -1.563 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.