Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2936 | 9031;9032;9033 | chr2:178769775;178769774;178769773 | chr2:179634502;179634501;179634500 |
N2AB | 2936 | 9031;9032;9033 | chr2:178769775;178769774;178769773 | chr2:179634502;179634501;179634500 |
N2A | 2936 | 9031;9032;9033 | chr2:178769775;178769774;178769773 | chr2:179634502;179634501;179634500 |
N2B | 2890 | 8893;8894;8895 | chr2:178769775;178769774;178769773 | chr2:179634502;179634501;179634500 |
Novex-1 | 2890 | 8893;8894;8895 | chr2:178769775;178769774;178769773 | chr2:179634502;179634501;179634500 |
Novex-2 | 2890 | 8893;8894;8895 | chr2:178769775;178769774;178769773 | chr2:179634502;179634501;179634500 |
Novex-3 | 2936 | 9031;9032;9033 | chr2:178769775;178769774;178769773 | chr2:179634502;179634501;179634500 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs548456466 | -1.46 | 1.0 | N | 0.692 | 0.641 | 0.40146981186 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.44E-05 | None | 0 | None | 4.62E-05 | 0 | 0 |
H/R | rs548456466 | -1.46 | 1.0 | N | 0.692 | 0.641 | 0.40146981186 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.993 | likely_pathogenic | 0.9856 | pathogenic | -2.032 | Highly Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
H/C | 0.8409 | likely_pathogenic | 0.7572 | pathogenic | -1.172 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
H/D | 0.9974 | likely_pathogenic | 0.9937 | pathogenic | -1.993 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.648017231 | None | None | N |
H/E | 0.9957 | likely_pathogenic | 0.9898 | pathogenic | -1.78 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
H/F | 0.9381 | likely_pathogenic | 0.9023 | pathogenic | 0.032 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
H/G | 0.995 | likely_pathogenic | 0.9896 | pathogenic | -2.463 | Highly Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
H/I | 0.9898 | likely_pathogenic | 0.9809 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
H/K | 0.988 | likely_pathogenic | 0.9791 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
H/L | 0.88 | likely_pathogenic | 0.7927 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.583145418 | None | None | N |
H/M | 0.987 | likely_pathogenic | 0.9777 | pathogenic | -0.928 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
H/N | 0.947 | likely_pathogenic | 0.8867 | pathogenic | -2.099 | Highly Destabilizing | 0.999 | D | 0.597 | neutral | D | 0.591007689 | None | None | N |
H/P | 0.9925 | likely_pathogenic | 0.9868 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.672055556 | None | None | N |
H/Q | 0.9658 | likely_pathogenic | 0.9328 | pathogenic | -1.662 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.547162082 | None | None | N |
H/R | 0.9329 | likely_pathogenic | 0.887 | pathogenic | -1.515 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.508829541 | None | None | N |
H/S | 0.9795 | likely_pathogenic | 0.9588 | pathogenic | -2.241 | Highly Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
H/T | 0.9943 | likely_pathogenic | 0.9881 | pathogenic | -1.906 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
H/V | 0.9857 | likely_pathogenic | 0.9749 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
H/W | 0.9313 | likely_pathogenic | 0.9038 | pathogenic | 0.663 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
H/Y | 0.7575 | likely_pathogenic | 0.6238 | pathogenic | 0.387 | Stabilizing | 0.999 | D | 0.613 | neutral | N | 0.496401503 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.