Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29371 | 88336;88337;88338 | chr2:178557043;178557042;178557041 | chr2:179421770;179421769;179421768 |
N2AB | 27730 | 83413;83414;83415 | chr2:178557043;178557042;178557041 | chr2:179421770;179421769;179421768 |
N2A | 26803 | 80632;80633;80634 | chr2:178557043;178557042;178557041 | chr2:179421770;179421769;179421768 |
N2B | 20306 | 61141;61142;61143 | chr2:178557043;178557042;178557041 | chr2:179421770;179421769;179421768 |
Novex-1 | 20431 | 61516;61517;61518 | chr2:178557043;178557042;178557041 | chr2:179421770;179421769;179421768 |
Novex-2 | 20498 | 61717;61718;61719 | chr2:178557043;178557042;178557041 | chr2:179421770;179421769;179421768 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.001 | N | 0.499 | 0.222 | 0.499345284858 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85801E-06 | 0 | 0 |
I/N | rs767890385 | -2.083 | 0.484 | N | 0.699 | 0.311 | 0.72990446813 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/N | rs767890385 | -2.083 | 0.484 | N | 0.699 | 0.311 | 0.72990446813 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/N | rs767890385 | -2.083 | 0.484 | N | 0.699 | 0.311 | 0.72990446813 | gnomAD-4.0.0 | 1.85912E-06 | None | None | None | None | N | None | 2.66937E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47571E-07 | 0 | 0 |
I/T | rs767890385 | -2.296 | 0.117 | N | 0.665 | 0.183 | None | gnomAD-2.1.1 | 4.02E-05 | None | None | None | None | N | None | 6.46E-05 | 1.73974E-04 | None | 0 | 5.61E-05 | None | 3.27E-05 | None | 0 | 8.89E-06 | 0 |
I/T | rs767890385 | -2.296 | 0.117 | N | 0.665 | 0.183 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs767890385 | -2.296 | 0.117 | N | 0.665 | 0.183 | None | gnomAD-4.0.0 | 2.5408E-05 | None | None | None | None | N | None | 2.66937E-05 | 1.16706E-04 | None | 0 | 0 | None | 0 | 0 | 2.62747E-05 | 1.09798E-05 | 0 |
I/V | rs1229603276 | -1.081 | None | N | 0.259 | 0.073 | 0.313210971179 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/V | rs1229603276 | -1.081 | None | N | 0.259 | 0.073 | 0.313210971179 | gnomAD-4.0.0 | 3.18286E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 2.85801E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.268 | likely_benign | 0.2126 | benign | -2.59 | Highly Destabilizing | 0.035 | N | 0.635 | neutral | None | None | None | None | N |
I/C | 0.6379 | likely_pathogenic | 0.5696 | pathogenic | -1.801 | Destabilizing | 0.935 | D | 0.663 | neutral | None | None | None | None | N |
I/D | 0.725 | likely_pathogenic | 0.6686 | pathogenic | -2.893 | Highly Destabilizing | 0.555 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/E | 0.6427 | likely_pathogenic | 0.584 | pathogenic | -2.658 | Highly Destabilizing | 0.555 | D | 0.683 | prob.neutral | None | None | None | None | N |
I/F | 0.1508 | likely_benign | 0.1239 | benign | -1.515 | Destabilizing | 0.001 | N | 0.499 | neutral | N | 0.48229379 | None | None | N |
I/G | 0.6983 | likely_pathogenic | 0.6155 | pathogenic | -3.133 | Highly Destabilizing | 0.38 | N | 0.684 | prob.neutral | None | None | None | None | N |
I/H | 0.4531 | ambiguous | 0.386 | ambiguous | -2.583 | Highly Destabilizing | 0.935 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/K | 0.5368 | ambiguous | 0.4764 | ambiguous | -2.021 | Highly Destabilizing | 0.38 | N | 0.673 | neutral | None | None | None | None | N |
I/L | 0.0955 | likely_benign | 0.0941 | benign | -1.015 | Destabilizing | None | N | 0.279 | neutral | N | 0.490369481 | None | None | N |
I/M | 0.0756 | likely_benign | 0.0806 | benign | -0.991 | Destabilizing | 0.004 | N | 0.509 | neutral | N | 0.49984184 | None | None | N |
I/N | 0.2981 | likely_benign | 0.2404 | benign | -2.38 | Highly Destabilizing | 0.484 | N | 0.699 | prob.neutral | N | 0.473606829 | None | None | N |
I/P | 0.9711 | likely_pathogenic | 0.9629 | pathogenic | -1.522 | Destabilizing | 0.791 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/Q | 0.4535 | ambiguous | 0.4176 | ambiguous | -2.227 | Highly Destabilizing | 0.38 | N | 0.691 | prob.neutral | None | None | None | None | N |
I/R | 0.4104 | ambiguous | 0.3309 | benign | -1.733 | Destabilizing | 0.38 | N | 0.699 | prob.neutral | None | None | None | None | N |
I/S | 0.2445 | likely_benign | 0.1986 | benign | -3.056 | Highly Destabilizing | 0.317 | N | 0.65 | neutral | N | 0.480568589 | None | None | N |
I/T | 0.1205 | likely_benign | 0.1011 | benign | -2.681 | Highly Destabilizing | 0.117 | N | 0.665 | neutral | N | 0.5002584 | None | None | N |
I/V | 0.0701 | likely_benign | 0.0655 | benign | -1.522 | Destabilizing | None | N | 0.259 | neutral | N | 0.467281977 | None | None | N |
I/W | 0.7057 | likely_pathogenic | 0.6686 | pathogenic | -1.92 | Destabilizing | 0.935 | D | 0.698 | prob.neutral | None | None | None | None | N |
I/Y | 0.4685 | ambiguous | 0.4125 | ambiguous | -1.638 | Destabilizing | 0.235 | N | 0.694 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.