Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29373 | 88342;88343;88344 | chr2:178557037;178557036;178557035 | chr2:179421764;179421763;179421762 |
N2AB | 27732 | 83419;83420;83421 | chr2:178557037;178557036;178557035 | chr2:179421764;179421763;179421762 |
N2A | 26805 | 80638;80639;80640 | chr2:178557037;178557036;178557035 | chr2:179421764;179421763;179421762 |
N2B | 20308 | 61147;61148;61149 | chr2:178557037;178557036;178557035 | chr2:179421764;179421763;179421762 |
Novex-1 | 20433 | 61522;61523;61524 | chr2:178557037;178557036;178557035 | chr2:179421764;179421763;179421762 |
Novex-2 | 20500 | 61723;61724;61725 | chr2:178557037;178557036;178557035 | chr2:179421764;179421763;179421762 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs762557803 | -1.189 | 0.117 | D | 0.439 | 0.415 | 0.251639045875 | gnomAD-2.1.1 | 6.84E-05 | None | None | None | None | N | None | 0 | 3.47947E-04 | None | 9.95E-05 | 0 | None | 0 | None | 0 | 8.89E-06 | 4.97678E-04 |
E/K | rs762557803 | -1.189 | 0.117 | D | 0.439 | 0.415 | 0.251639045875 | gnomAD-4.0.0 | 2.70543E-05 | None | None | None | None | N | None | 0 | 3.20088E-04 | None | 4.7669E-05 | 0 | None | 0 | 0 | 0 | 0 | 6.04887E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.921 | likely_pathogenic | 0.8851 | pathogenic | -1.373 | Destabilizing | 0.977 | D | 0.636 | neutral | D | 0.541445628 | None | None | N |
E/C | 0.992 | likely_pathogenic | 0.9894 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/D | 0.9135 | likely_pathogenic | 0.8754 | pathogenic | -1.65 | Destabilizing | 0.977 | D | 0.621 | neutral | N | 0.506148944 | None | None | N |
E/F | 0.9948 | likely_pathogenic | 0.992 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/G | 0.9507 | likely_pathogenic | 0.9229 | pathogenic | -1.774 | Destabilizing | 0.993 | D | 0.755 | deleterious | D | 0.54980342 | None | None | N |
E/H | 0.9845 | likely_pathogenic | 0.9767 | pathogenic | -0.899 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/I | 0.9813 | likely_pathogenic | 0.9742 | pathogenic | -0.218 | Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
E/K | 0.9535 | likely_pathogenic | 0.9329 | pathogenic | -1.233 | Destabilizing | 0.117 | N | 0.439 | neutral | D | 0.524048935 | None | None | N |
E/L | 0.9759 | likely_pathogenic | 0.9654 | pathogenic | -0.218 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
E/M | 0.9713 | likely_pathogenic | 0.9604 | pathogenic | 0.481 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/N | 0.9863 | likely_pathogenic | 0.9774 | pathogenic | -1.509 | Destabilizing | 0.995 | D | 0.784 | deleterious | None | None | None | None | N |
E/P | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -0.589 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
E/Q | 0.7164 | likely_pathogenic | 0.6382 | pathogenic | -1.183 | Destabilizing | 0.977 | D | 0.714 | prob.delet. | N | 0.481573001 | None | None | N |
E/R | 0.9702 | likely_pathogenic | 0.9577 | pathogenic | -1.14 | Destabilizing | 0.99 | D | 0.783 | deleterious | None | None | None | None | N |
E/S | 0.9433 | likely_pathogenic | 0.9137 | pathogenic | -2.139 | Highly Destabilizing | 0.983 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/T | 0.9744 | likely_pathogenic | 0.9616 | pathogenic | -1.747 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
E/V | 0.9541 | likely_pathogenic | 0.9372 | pathogenic | -0.589 | Destabilizing | 0.997 | D | 0.778 | deleterious | D | 0.530849791 | None | None | N |
E/W | 0.9979 | likely_pathogenic | 0.997 | pathogenic | -1.152 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/Y | 0.9909 | likely_pathogenic | 0.9872 | pathogenic | -0.846 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.