Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29383 | 88372;88373;88374 | chr2:178557007;178557006;178557005 | chr2:179421734;179421733;179421732 |
N2AB | 27742 | 83449;83450;83451 | chr2:178557007;178557006;178557005 | chr2:179421734;179421733;179421732 |
N2A | 26815 | 80668;80669;80670 | chr2:178557007;178557006;178557005 | chr2:179421734;179421733;179421732 |
N2B | 20318 | 61177;61178;61179 | chr2:178557007;178557006;178557005 | chr2:179421734;179421733;179421732 |
Novex-1 | 20443 | 61552;61553;61554 | chr2:178557007;178557006;178557005 | chr2:179421734;179421733;179421732 |
Novex-2 | 20510 | 61753;61754;61755 | chr2:178557007;178557006;178557005 | chr2:179421734;179421733;179421732 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2154155238 | None | 0.062 | N | 0.297 | 0.166 | 0.292062946507 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs2154155238 | None | 0.001 | N | 0.101 | 0.083 | 0.0762999501168 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0879 | likely_benign | 0.0825 | benign | -0.918 | Destabilizing | None | N | 0.087 | neutral | N | 0.45479547 | None | None | N |
T/C | 0.3519 | ambiguous | 0.3441 | ambiguous | -0.605 | Destabilizing | 0.824 | D | 0.342 | neutral | None | None | None | None | N |
T/D | 0.5631 | ambiguous | 0.5036 | ambiguous | 0.005 | Stabilizing | 0.149 | N | 0.327 | neutral | None | None | None | None | N |
T/E | 0.3702 | ambiguous | 0.3164 | benign | 0.03 | Stabilizing | 0.149 | N | 0.263 | neutral | None | None | None | None | N |
T/F | 0.3317 | likely_benign | 0.2586 | benign | -0.87 | Destabilizing | 0.001 | N | 0.267 | neutral | None | None | None | None | N |
T/G | 0.2488 | likely_benign | 0.2376 | benign | -1.196 | Destabilizing | 0.035 | N | 0.311 | neutral | None | None | None | None | N |
T/H | 0.3005 | likely_benign | 0.2651 | benign | -1.335 | Destabilizing | 0.935 | D | 0.313 | neutral | None | None | None | None | N |
T/I | 0.1533 | likely_benign | 0.1258 | benign | -0.263 | Destabilizing | 0.062 | N | 0.297 | neutral | N | 0.413026205 | None | None | N |
T/K | 0.2895 | likely_benign | 0.236 | benign | -0.658 | Destabilizing | 0.149 | N | 0.276 | neutral | None | None | None | None | N |
T/L | 0.096 | likely_benign | 0.0847 | benign | -0.263 | Destabilizing | 0.035 | N | 0.348 | neutral | None | None | None | None | N |
T/M | 0.0769 | likely_benign | 0.0723 | benign | -0.109 | Destabilizing | 0.555 | D | 0.35 | neutral | None | None | None | None | N |
T/N | 0.1332 | likely_benign | 0.127 | benign | -0.642 | Destabilizing | 0.117 | N | 0.299 | neutral | N | 0.456795625 | None | None | N |
T/P | 0.593 | likely_pathogenic | 0.5447 | ambiguous | -0.449 | Destabilizing | 0.317 | N | 0.379 | neutral | N | 0.509611389 | None | None | N |
T/Q | 0.2093 | likely_benign | 0.193 | benign | -0.759 | Destabilizing | 0.555 | D | 0.381 | neutral | None | None | None | None | N |
T/R | 0.2538 | likely_benign | 0.1998 | benign | -0.455 | Destabilizing | 0.38 | N | 0.378 | neutral | None | None | None | None | N |
T/S | 0.1172 | likely_benign | 0.1135 | benign | -1.0 | Destabilizing | 0.001 | N | 0.101 | neutral | N | 0.426763506 | None | None | N |
T/V | 0.1178 | likely_benign | 0.1024 | benign | -0.449 | Destabilizing | 0.002 | N | 0.131 | neutral | None | None | None | None | N |
T/W | 0.6835 | likely_pathogenic | 0.5979 | pathogenic | -0.771 | Destabilizing | 0.935 | D | 0.342 | neutral | None | None | None | None | N |
T/Y | 0.3466 | ambiguous | 0.2849 | benign | -0.548 | Destabilizing | 0.235 | N | 0.348 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.