Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29392 | 88399;88400;88401 | chr2:178556980;178556979;178556978 | chr2:179421707;179421706;179421705 |
N2AB | 27751 | 83476;83477;83478 | chr2:178556980;178556979;178556978 | chr2:179421707;179421706;179421705 |
N2A | 26824 | 80695;80696;80697 | chr2:178556980;178556979;178556978 | chr2:179421707;179421706;179421705 |
N2B | 20327 | 61204;61205;61206 | chr2:178556980;178556979;178556978 | chr2:179421707;179421706;179421705 |
Novex-1 | 20452 | 61579;61580;61581 | chr2:178556980;178556979;178556978 | chr2:179421707;179421706;179421705 |
Novex-2 | 20519 | 61780;61781;61782 | chr2:178556980;178556979;178556978 | chr2:179421707;179421706;179421705 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1553551691 | None | 0.978 | N | 0.533 | 0.351 | 0.338834610459 | gnomAD-4.0.0 | 3.18261E-06 | None | None | None | None | I | None | 5.65291E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2164 | likely_benign | 0.173 | benign | -0.291 | Destabilizing | 0.989 | D | 0.601 | neutral | N | 0.504242855 | None | None | I |
E/C | 0.9184 | likely_pathogenic | 0.8964 | pathogenic | -0.279 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/D | 0.0896 | likely_benign | 0.0905 | benign | -0.519 | Destabilizing | 0.054 | N | 0.166 | neutral | N | 0.413122205 | None | None | I |
E/F | 0.923 | likely_pathogenic | 0.8905 | pathogenic | 0.127 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
E/G | 0.1856 | likely_benign | 0.1513 | benign | -0.536 | Destabilizing | 0.978 | D | 0.55 | neutral | N | 0.470650356 | None | None | I |
E/H | 0.5909 | likely_pathogenic | 0.5337 | ambiguous | 0.522 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | I |
E/I | 0.682 | likely_pathogenic | 0.5998 | pathogenic | 0.338 | Stabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
E/K | 0.2127 | likely_benign | 0.1738 | benign | 0.286 | Stabilizing | 0.978 | D | 0.533 | neutral | N | 0.489620119 | None | None | I |
E/L | 0.6931 | likely_pathogenic | 0.6092 | pathogenic | 0.338 | Stabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/M | 0.6849 | likely_pathogenic | 0.6068 | pathogenic | 0.222 | Stabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
E/N | 0.2338 | likely_benign | 0.2023 | benign | -0.303 | Destabilizing | 0.995 | D | 0.601 | neutral | None | None | None | None | I |
E/P | 0.8953 | likely_pathogenic | 0.8664 | pathogenic | 0.149 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/Q | 0.1991 | likely_benign | 0.1721 | benign | -0.21 | Destabilizing | 0.997 | D | 0.586 | neutral | N | 0.505493649 | None | None | I |
E/R | 0.3884 | ambiguous | 0.3313 | benign | 0.669 | Stabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | I |
E/S | 0.223 | likely_benign | 0.1862 | benign | -0.441 | Destabilizing | 0.983 | D | 0.539 | neutral | None | None | None | None | I |
E/T | 0.3014 | likely_benign | 0.2441 | benign | -0.225 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | I |
E/V | 0.4333 | ambiguous | 0.362 | ambiguous | 0.149 | Stabilizing | 0.999 | D | 0.684 | prob.neutral | N | 0.516076002 | None | None | I |
E/W | 0.9717 | likely_pathogenic | 0.958 | pathogenic | 0.345 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/Y | 0.811 | likely_pathogenic | 0.7515 | pathogenic | 0.399 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.