Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29397 | 88414;88415;88416 | chr2:178556965;178556964;178556963 | chr2:179421692;179421691;179421690 |
N2AB | 27756 | 83491;83492;83493 | chr2:178556965;178556964;178556963 | chr2:179421692;179421691;179421690 |
N2A | 26829 | 80710;80711;80712 | chr2:178556965;178556964;178556963 | chr2:179421692;179421691;179421690 |
N2B | 20332 | 61219;61220;61221 | chr2:178556965;178556964;178556963 | chr2:179421692;179421691;179421690 |
Novex-1 | 20457 | 61594;61595;61596 | chr2:178556965;178556964;178556963 | chr2:179421692;179421691;179421690 |
Novex-2 | 20524 | 61795;61796;61797 | chr2:178556965;178556964;178556963 | chr2:179421692;179421691;179421690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1475393277 | None | 0.012 | N | 0.644 | 0.411 | 0.664245949781 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs1475393277 | None | 0.012 | N | 0.644 | 0.411 | 0.664245949781 | gnomAD-4.0.0 | 6.57194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47007E-05 | 0 | 0 |
I/V | rs1701748367 | None | None | N | 0.167 | 0.127 | 0.337135696972 | gnomAD-4.0.0 | 1.36853E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99526E-07 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4358 | ambiguous | 0.3224 | benign | -1.917 | Destabilizing | 0.007 | N | 0.582 | neutral | None | None | None | None | N |
I/C | 0.6755 | likely_pathogenic | 0.6167 | pathogenic | -1.343 | Destabilizing | 0.356 | N | 0.763 | deleterious | None | None | None | None | N |
I/D | 0.9716 | likely_pathogenic | 0.9435 | pathogenic | -1.586 | Destabilizing | 0.356 | N | 0.777 | deleterious | None | None | None | None | N |
I/E | 0.9553 | likely_pathogenic | 0.9201 | pathogenic | -1.307 | Destabilizing | 0.136 | N | 0.749 | deleterious | None | None | None | None | N |
I/F | 0.488 | ambiguous | 0.3471 | ambiguous | -1.049 | Destabilizing | 0.055 | N | 0.662 | neutral | D | 0.522079254 | None | None | N |
I/G | 0.8877 | likely_pathogenic | 0.7721 | pathogenic | -2.485 | Highly Destabilizing | 0.136 | N | 0.745 | deleterious | None | None | None | None | N |
I/H | 0.9264 | likely_pathogenic | 0.8816 | pathogenic | -1.999 | Destabilizing | 0.864 | D | 0.815 | deleterious | None | None | None | None | N |
I/K | 0.945 | likely_pathogenic | 0.9175 | pathogenic | -1.233 | Destabilizing | 0.136 | N | 0.749 | deleterious | None | None | None | None | N |
I/L | 0.1634 | likely_benign | 0.1356 | benign | -0.265 | Destabilizing | 0.002 | N | 0.354 | neutral | N | 0.450962944 | None | None | N |
I/M | 0.2241 | likely_benign | 0.1746 | benign | -0.435 | Destabilizing | 0.171 | N | 0.663 | neutral | N | 0.483084393 | None | None | N |
I/N | 0.7999 | likely_pathogenic | 0.6914 | pathogenic | -1.693 | Destabilizing | 0.56 | D | 0.799 | deleterious | N | 0.501695627 | None | None | N |
I/P | 0.9314 | likely_pathogenic | 0.8897 | pathogenic | -0.798 | Destabilizing | 0.356 | N | 0.78 | deleterious | None | None | None | None | N |
I/Q | 0.9156 | likely_pathogenic | 0.865 | pathogenic | -1.367 | Destabilizing | 0.628 | D | 0.807 | deleterious | None | None | None | None | N |
I/R | 0.9038 | likely_pathogenic | 0.8591 | pathogenic | -1.373 | Destabilizing | 0.356 | N | 0.807 | deleterious | None | None | None | None | N |
I/S | 0.6316 | likely_pathogenic | 0.496 | ambiguous | -2.466 | Highly Destabilizing | 0.055 | N | 0.727 | prob.delet. | N | 0.486046907 | None | None | N |
I/T | 0.4711 | ambiguous | 0.365 | ambiguous | -2.008 | Highly Destabilizing | 0.012 | N | 0.644 | neutral | N | 0.478564942 | None | None | N |
I/V | 0.0644 | likely_benign | 0.06 | benign | -0.798 | Destabilizing | None | N | 0.167 | neutral | N | 0.349030654 | None | None | N |
I/W | 0.9793 | likely_pathogenic | 0.9597 | pathogenic | -1.312 | Destabilizing | 0.864 | D | 0.81 | deleterious | None | None | None | None | N |
I/Y | 0.8806 | likely_pathogenic | 0.7984 | pathogenic | -0.995 | Destabilizing | 0.356 | N | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.