Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29399 | 88420;88421;88422 | chr2:178556959;178556958;178556957 | chr2:179421686;179421685;179421684 |
N2AB | 27758 | 83497;83498;83499 | chr2:178556959;178556958;178556957 | chr2:179421686;179421685;179421684 |
N2A | 26831 | 80716;80717;80718 | chr2:178556959;178556958;178556957 | chr2:179421686;179421685;179421684 |
N2B | 20334 | 61225;61226;61227 | chr2:178556959;178556958;178556957 | chr2:179421686;179421685;179421684 |
Novex-1 | 20459 | 61600;61601;61602 | chr2:178556959;178556958;178556957 | chr2:179421686;179421685;179421684 |
Novex-2 | 20526 | 61801;61802;61803 | chr2:178556959;178556958;178556957 | chr2:179421686;179421685;179421684 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs1701744078 | None | 1.0 | N | 0.694 | 0.406 | 0.243972157842 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/A | rs1701744078 | None | 1.0 | N | 0.694 | 0.406 | 0.243972157842 | gnomAD-4.0.0 | 2.56222E-06 | None | None | None | None | I | None | 3.38215E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3039 | likely_benign | 0.2215 | benign | -0.174 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | N | 0.489452451 | None | None | I |
G/C | 0.4541 | ambiguous | 0.3568 | ambiguous | -0.846 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.538031224 | None | None | I |
G/D | 0.5018 | ambiguous | 0.3754 | ambiguous | -0.145 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.492305347 | None | None | I |
G/E | 0.6032 | likely_pathogenic | 0.4558 | ambiguous | -0.303 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
G/F | 0.901 | likely_pathogenic | 0.8267 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
G/H | 0.7135 | likely_pathogenic | 0.5856 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
G/I | 0.7864 | likely_pathogenic | 0.6853 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
G/K | 0.8551 | likely_pathogenic | 0.752 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
G/L | 0.8133 | likely_pathogenic | 0.7171 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
G/M | 0.8239 | likely_pathogenic | 0.7254 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
G/N | 0.433 | ambiguous | 0.3139 | benign | -0.221 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
G/P | 0.9647 | likely_pathogenic | 0.9435 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
G/Q | 0.673 | likely_pathogenic | 0.5378 | ambiguous | -0.466 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
G/R | 0.7287 | likely_pathogenic | 0.5883 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.479070424 | None | None | I |
G/S | 0.1616 | likely_benign | 0.1192 | benign | -0.415 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.477562713 | None | None | I |
G/T | 0.4123 | ambiguous | 0.2983 | benign | -0.493 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
G/V | 0.643 | likely_pathogenic | 0.5195 | ambiguous | -0.259 | Destabilizing | 1.0 | D | 0.768 | deleterious | D | 0.526674919 | None | None | I |
G/W | 0.8387 | likely_pathogenic | 0.7393 | pathogenic | -1.054 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
G/Y | 0.8206 | likely_pathogenic | 0.7105 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.