Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29401 | 88426;88427;88428 | chr2:178556953;178556952;178556951 | chr2:179421680;179421679;179421678 |
N2AB | 27760 | 83503;83504;83505 | chr2:178556953;178556952;178556951 | chr2:179421680;179421679;179421678 |
N2A | 26833 | 80722;80723;80724 | chr2:178556953;178556952;178556951 | chr2:179421680;179421679;179421678 |
N2B | 20336 | 61231;61232;61233 | chr2:178556953;178556952;178556951 | chr2:179421680;179421679;179421678 |
Novex-1 | 20461 | 61606;61607;61608 | chr2:178556953;178556952;178556951 | chr2:179421680;179421679;179421678 |
Novex-2 | 20528 | 61807;61808;61809 | chr2:178556953;178556952;178556951 | chr2:179421680;179421679;179421678 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.004 | N | 0.281 | 0.109 | 0.252162846088 | gnomAD-4.0.0 | 6.84215E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99441E-07 | 0 | 0 |
T/N | None | None | 0.015 | N | 0.234 | 0.099 | 0.224531998449 | gnomAD-4.0.0 | 6.84215E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99441E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0966 | likely_benign | 0.0939 | benign | -0.784 | Destabilizing | 0.334 | N | 0.402 | neutral | N | 0.468330591 | None | None | N |
T/C | 0.4388 | ambiguous | 0.4267 | ambiguous | -0.344 | Destabilizing | 0.982 | D | 0.581 | neutral | None | None | None | None | N |
T/D | 0.5023 | ambiguous | 0.4468 | ambiguous | -0.041 | Destabilizing | 0.539 | D | 0.5 | neutral | None | None | None | None | N |
T/E | 0.3675 | ambiguous | 0.3201 | benign | -0.076 | Destabilizing | 0.7 | D | 0.497 | neutral | None | None | None | None | N |
T/F | 0.309 | likely_benign | 0.2507 | benign | -1.041 | Destabilizing | 0.7 | D | 0.639 | neutral | None | None | None | None | N |
T/G | 0.2873 | likely_benign | 0.2721 | benign | -0.994 | Destabilizing | 0.399 | N | 0.505 | neutral | None | None | None | None | N |
T/H | 0.2751 | likely_benign | 0.2508 | benign | -1.257 | Destabilizing | 0.947 | D | 0.632 | neutral | None | None | None | None | N |
T/I | 0.1524 | likely_benign | 0.123 | benign | -0.329 | Destabilizing | 0.004 | N | 0.281 | neutral | N | 0.468650201 | None | None | N |
T/K | 0.2335 | likely_benign | 0.198 | benign | -0.629 | Destabilizing | 0.7 | D | 0.515 | neutral | None | None | None | None | N |
T/L | 0.0953 | likely_benign | 0.0849 | benign | -0.329 | Destabilizing | 0.103 | N | 0.41 | neutral | None | None | None | None | N |
T/M | 0.0908 | likely_benign | 0.087 | benign | 0.034 | Stabilizing | 0.898 | D | 0.579 | neutral | None | None | None | None | N |
T/N | 0.123 | likely_benign | 0.116 | benign | -0.449 | Destabilizing | 0.015 | N | 0.234 | neutral | N | 0.494970011 | None | None | N |
T/P | 0.1504 | likely_benign | 0.1504 | benign | -0.45 | Destabilizing | 0.916 | D | 0.573 | neutral | N | 0.495032901 | None | None | N |
T/Q | 0.2023 | likely_benign | 0.191 | benign | -0.659 | Destabilizing | 0.826 | D | 0.571 | neutral | None | None | None | None | N |
T/R | 0.2206 | likely_benign | 0.1848 | benign | -0.33 | Destabilizing | 0.826 | D | 0.573 | neutral | None | None | None | None | N |
T/S | 0.1102 | likely_benign | 0.1088 | benign | -0.728 | Destabilizing | 0.334 | N | 0.416 | neutral | N | 0.467148691 | None | None | N |
T/V | 0.1267 | likely_benign | 0.1133 | benign | -0.45 | Destabilizing | 0.103 | N | 0.403 | neutral | None | None | None | None | N |
T/W | 0.7227 | likely_pathogenic | 0.673 | pathogenic | -0.972 | Destabilizing | 0.982 | D | 0.669 | neutral | None | None | None | None | N |
T/Y | 0.3611 | ambiguous | 0.3259 | benign | -0.745 | Destabilizing | 0.826 | D | 0.64 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.