Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29410 | 88453;88454;88455 | chr2:178556926;178556925;178556924 | chr2:179421653;179421652;179421651 |
N2AB | 27769 | 83530;83531;83532 | chr2:178556926;178556925;178556924 | chr2:179421653;179421652;179421651 |
N2A | 26842 | 80749;80750;80751 | chr2:178556926;178556925;178556924 | chr2:179421653;179421652;179421651 |
N2B | 20345 | 61258;61259;61260 | chr2:178556926;178556925;178556924 | chr2:179421653;179421652;179421651 |
Novex-1 | 20470 | 61633;61634;61635 | chr2:178556926;178556925;178556924 | chr2:179421653;179421652;179421651 |
Novex-2 | 20537 | 61834;61835;61836 | chr2:178556926;178556925;178556924 | chr2:179421653;179421652;179421651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.669 | 0.798 | 0.803732359025 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7877 | likely_pathogenic | 0.7399 | pathogenic | -2.41 | Highly Destabilizing | 0.999 | D | 0.669 | neutral | D | 0.56992536 | None | None | N |
V/C | 0.948 | likely_pathogenic | 0.9379 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/D | 0.9977 | likely_pathogenic | 0.9969 | pathogenic | -3.352 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.658039918 | None | None | N |
V/E | 0.9949 | likely_pathogenic | 0.9933 | pathogenic | -3.028 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/F | 0.9056 | likely_pathogenic | 0.8702 | pathogenic | -1.39 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.587865031 | None | None | N |
V/G | 0.917 | likely_pathogenic | 0.8942 | pathogenic | -2.999 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | D | 0.658039918 | None | None | N |
V/H | 0.9983 | likely_pathogenic | 0.9975 | pathogenic | -2.903 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/I | 0.1031 | likely_benign | 0.0963 | benign | -0.678 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.52046118 | None | None | N |
V/K | 0.9967 | likely_pathogenic | 0.9961 | pathogenic | -1.904 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
V/L | 0.7018 | likely_pathogenic | 0.6208 | pathogenic | -0.678 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | D | 0.524888077 | None | None | N |
V/M | 0.7945 | likely_pathogenic | 0.734 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
V/N | 0.9898 | likely_pathogenic | 0.9873 | pathogenic | -2.638 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
V/P | 0.9927 | likely_pathogenic | 0.9906 | pathogenic | -1.241 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/Q | 0.9935 | likely_pathogenic | 0.9916 | pathogenic | -2.255 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
V/R | 0.9912 | likely_pathogenic | 0.9898 | pathogenic | -2.056 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
V/S | 0.9489 | likely_pathogenic | 0.9346 | pathogenic | -3.066 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/T | 0.9081 | likely_pathogenic | 0.8821 | pathogenic | -2.589 | Highly Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
V/W | 0.999 | likely_pathogenic | 0.9983 | pathogenic | -1.913 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Y | 0.991 | likely_pathogenic | 0.9881 | pathogenic | -1.641 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.