Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29421 | 88486;88487;88488 | chr2:178556893;178556892;178556891 | chr2:179421620;179421619;179421618 |
N2AB | 27780 | 83563;83564;83565 | chr2:178556893;178556892;178556891 | chr2:179421620;179421619;179421618 |
N2A | 26853 | 80782;80783;80784 | chr2:178556893;178556892;178556891 | chr2:179421620;179421619;179421618 |
N2B | 20356 | 61291;61292;61293 | chr2:178556893;178556892;178556891 | chr2:179421620;179421619;179421618 |
Novex-1 | 20481 | 61666;61667;61668 | chr2:178556893;178556892;178556891 | chr2:179421620;179421619;179421618 |
Novex-2 | 20548 | 61867;61868;61869 | chr2:178556893;178556892;178556891 | chr2:179421620;179421619;179421618 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.999 | N | 0.549 | 0.262 | 0.273938319068 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1762 | likely_benign | 0.168 | benign | -0.756 | Destabilizing | 0.971 | D | 0.581 | neutral | None | None | None | None | I |
N/C | 0.2415 | likely_benign | 0.2352 | benign | 0.13 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
N/D | 0.2167 | likely_benign | 0.1935 | benign | 0.06 | Stabilizing | 0.98 | D | 0.584 | neutral | N | 0.346878571 | None | None | I |
N/E | 0.4061 | ambiguous | 0.3605 | ambiguous | 0.075 | Stabilizing | 0.985 | D | 0.584 | neutral | None | None | None | None | I |
N/F | 0.4826 | ambiguous | 0.4151 | ambiguous | -0.901 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | I |
N/G | 0.259 | likely_benign | 0.258 | benign | -0.996 | Destabilizing | 0.985 | D | 0.477 | neutral | None | None | None | None | I |
N/H | 0.1184 | likely_benign | 0.1129 | benign | -0.855 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.432073326 | None | None | I |
N/I | 0.1647 | likely_benign | 0.1442 | benign | -0.188 | Destabilizing | 0.989 | D | 0.644 | neutral | N | 0.41158341 | None | None | I |
N/K | 0.3001 | likely_benign | 0.2689 | benign | -0.086 | Destabilizing | 0.98 | D | 0.581 | neutral | N | 0.370158075 | None | None | I |
N/L | 0.1634 | likely_benign | 0.1491 | benign | -0.188 | Destabilizing | 0.171 | N | 0.517 | neutral | None | None | None | None | I |
N/M | 0.2811 | likely_benign | 0.2601 | benign | 0.218 | Stabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | I |
N/P | 0.2888 | likely_benign | 0.2811 | benign | -0.35 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | I |
N/Q | 0.3026 | likely_benign | 0.292 | benign | -0.618 | Destabilizing | 0.998 | D | 0.562 | neutral | None | None | None | None | I |
N/R | 0.3643 | ambiguous | 0.3227 | benign | -0.037 | Destabilizing | 0.998 | D | 0.565 | neutral | None | None | None | None | I |
N/S | 0.0802 | likely_benign | 0.0804 | benign | -0.524 | Destabilizing | 0.659 | D | 0.306 | neutral | N | 0.434150839 | None | None | I |
N/T | 0.1367 | likely_benign | 0.1289 | benign | -0.332 | Destabilizing | 0.961 | D | 0.523 | neutral | N | 0.413140848 | None | None | I |
N/V | 0.1688 | likely_benign | 0.1534 | benign | -0.35 | Destabilizing | 0.991 | D | 0.64 | neutral | None | None | None | None | I |
N/W | 0.7847 | likely_pathogenic | 0.741 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
N/Y | 0.1699 | likely_benign | 0.1454 | benign | -0.539 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | N | 0.478557764 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.