Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29424 | 88495;88496;88497 | chr2:178556884;178556883;178556882 | chr2:179421611;179421610;179421609 |
N2AB | 27783 | 83572;83573;83574 | chr2:178556884;178556883;178556882 | chr2:179421611;179421610;179421609 |
N2A | 26856 | 80791;80792;80793 | chr2:178556884;178556883;178556882 | chr2:179421611;179421610;179421609 |
N2B | 20359 | 61300;61301;61302 | chr2:178556884;178556883;178556882 | chr2:179421611;179421610;179421609 |
Novex-1 | 20484 | 61675;61676;61677 | chr2:178556884;178556883;178556882 | chr2:179421611;179421610;179421609 |
Novex-2 | 20551 | 61876;61877;61878 | chr2:178556884;178556883;178556882 | chr2:179421611;179421610;179421609 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs9808036 | None | 0.002 | N | 0.23 | 0.048 | 0.0920862733494 | gnomAD-4.0.0 | 3.42122E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49724E-06 | 0 | 0 |
E/K | None | None | 0.651 | N | 0.404 | 0.227 | 0.210429274316 | gnomAD-4.0.0 | 3.18278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71598E-06 | 0 | 0 |
E/Q | rs763574979 | -0.67 | 0.791 | N | 0.42 | 0.128 | 0.206339911435 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/Q | rs763574979 | -0.67 | 0.791 | N | 0.42 | 0.128 | 0.206339911435 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1467 | likely_benign | 0.1409 | benign | -0.11 | Destabilizing | 0.435 | N | 0.483 | neutral | N | 0.494785505 | None | None | N |
E/C | 0.797 | likely_pathogenic | 0.7978 | pathogenic | -0.092 | Destabilizing | 0.995 | D | 0.631 | neutral | None | None | None | None | N |
E/D | 0.0807 | likely_benign | 0.0898 | benign | -0.289 | Destabilizing | 0.002 | N | 0.23 | neutral | N | 0.439238866 | None | None | N |
E/F | 0.7633 | likely_pathogenic | 0.7147 | pathogenic | -0.014 | Destabilizing | 0.897 | D | 0.623 | neutral | None | None | None | None | N |
E/G | 0.1977 | likely_benign | 0.1843 | benign | -0.269 | Destabilizing | 0.651 | D | 0.559 | neutral | N | 0.46339157 | None | None | N |
E/H | 0.4385 | ambiguous | 0.4231 | ambiguous | 0.435 | Stabilizing | 0.982 | D | 0.417 | neutral | None | None | None | None | N |
E/I | 0.3787 | ambiguous | 0.3358 | benign | 0.263 | Stabilizing | 0.032 | N | 0.569 | neutral | None | None | None | None | N |
E/K | 0.1737 | likely_benign | 0.1506 | benign | 0.501 | Stabilizing | 0.651 | D | 0.404 | neutral | N | 0.50025004 | None | None | N |
E/L | 0.3847 | ambiguous | 0.3532 | ambiguous | 0.263 | Stabilizing | 0.338 | N | 0.543 | neutral | None | None | None | None | N |
E/M | 0.4682 | ambiguous | 0.4238 | ambiguous | 0.127 | Stabilizing | 0.088 | N | 0.524 | neutral | None | None | None | None | N |
E/N | 0.1934 | likely_benign | 0.1975 | benign | 0.127 | Stabilizing | 0.553 | D | 0.379 | neutral | None | None | None | None | N |
E/P | 0.369 | ambiguous | 0.3913 | ambiguous | 0.158 | Stabilizing | 0.946 | D | 0.537 | neutral | None | None | None | None | N |
E/Q | 0.1702 | likely_benign | 0.1604 | benign | 0.165 | Stabilizing | 0.791 | D | 0.42 | neutral | N | 0.496825732 | None | None | N |
E/R | 0.2841 | likely_benign | 0.2563 | benign | 0.719 | Stabilizing | 0.946 | D | 0.383 | neutral | None | None | None | None | N |
E/S | 0.1753 | likely_benign | 0.1778 | benign | 0.013 | Stabilizing | 0.712 | D | 0.415 | neutral | None | None | None | None | N |
E/T | 0.2267 | likely_benign | 0.2167 | benign | 0.152 | Stabilizing | 0.712 | D | 0.483 | neutral | None | None | None | None | N |
E/V | 0.2195 | likely_benign | 0.1953 | benign | 0.158 | Stabilizing | 0.278 | N | 0.535 | neutral | N | 0.461443013 | None | None | N |
E/W | 0.8994 | likely_pathogenic | 0.8754 | pathogenic | 0.093 | Stabilizing | 0.995 | D | 0.651 | prob.neutral | None | None | None | None | N |
E/Y | 0.5959 | likely_pathogenic | 0.5631 | ambiguous | 0.228 | Stabilizing | 0.982 | D | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.