Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29426 | 88501;88502;88503 | chr2:178556878;178556877;178556876 | chr2:179421605;179421604;179421603 |
N2AB | 27785 | 83578;83579;83580 | chr2:178556878;178556877;178556876 | chr2:179421605;179421604;179421603 |
N2A | 26858 | 80797;80798;80799 | chr2:178556878;178556877;178556876 | chr2:179421605;179421604;179421603 |
N2B | 20361 | 61306;61307;61308 | chr2:178556878;178556877;178556876 | chr2:179421605;179421604;179421603 |
Novex-1 | 20486 | 61681;61682;61683 | chr2:178556878;178556877;178556876 | chr2:179421605;179421604;179421603 |
Novex-2 | 20553 | 61882;61883;61884 | chr2:178556878;178556877;178556876 | chr2:179421605;179421604;179421603 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.093 | 0.039 | 0.177238962908 | gnomAD-4.0.0 | 5.474E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19555E-06 | 0 | 0 |
V/G | None | None | 0.104 | N | 0.415 | 0.113 | 0.292062946507 | gnomAD-4.0.0 | 6.8425E-07 | None | None | None | None | I | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0873 | likely_benign | 0.0688 | benign | -1.522 | Destabilizing | None | N | 0.093 | neutral | N | 0.435334556 | None | None | I |
V/C | 0.6295 | likely_pathogenic | 0.5676 | pathogenic | -1.072 | Destabilizing | 0.953 | D | 0.366 | neutral | None | None | None | None | I |
V/D | 0.4896 | ambiguous | 0.3861 | ambiguous | -1.714 | Destabilizing | 0.724 | D | 0.514 | neutral | None | None | None | None | I |
V/E | 0.3923 | ambiguous | 0.3346 | benign | -1.542 | Destabilizing | 0.361 | N | 0.433 | neutral | N | 0.481530993 | None | None | I |
V/F | 0.21 | likely_benign | 0.1657 | benign | -0.833 | Destabilizing | 0.842 | D | 0.451 | neutral | None | None | None | None | I |
V/G | 0.2474 | likely_benign | 0.1905 | benign | -2.009 | Highly Destabilizing | 0.104 | N | 0.415 | neutral | N | 0.467793691 | None | None | I |
V/H | 0.633 | likely_pathogenic | 0.5531 | ambiguous | -1.663 | Destabilizing | 0.984 | D | 0.464 | neutral | None | None | None | None | I |
V/I | 0.0813 | likely_benign | 0.0772 | benign | -0.208 | Destabilizing | 0.189 | N | 0.453 | neutral | N | 0.430888742 | None | None | I |
V/K | 0.4827 | ambiguous | 0.4218 | ambiguous | -1.315 | Destabilizing | 0.428 | N | 0.425 | neutral | None | None | None | None | I |
V/L | 0.1556 | likely_benign | 0.1407 | benign | -0.208 | Destabilizing | 0.104 | N | 0.435 | neutral | N | 0.437796071 | None | None | I |
V/M | 0.1479 | likely_benign | 0.1316 | benign | -0.252 | Destabilizing | 0.942 | D | 0.385 | neutral | None | None | None | None | I |
V/N | 0.3824 | ambiguous | 0.2931 | benign | -1.52 | Destabilizing | 0.724 | D | 0.508 | neutral | None | None | None | None | I |
V/P | 0.5926 | likely_pathogenic | 0.4367 | ambiguous | -0.614 | Destabilizing | 0.842 | D | 0.457 | neutral | None | None | None | None | I |
V/Q | 0.4373 | ambiguous | 0.3714 | ambiguous | -1.414 | Destabilizing | 0.842 | D | 0.481 | neutral | None | None | None | None | I |
V/R | 0.4228 | ambiguous | 0.3593 | ambiguous | -1.122 | Destabilizing | 0.724 | D | 0.526 | neutral | None | None | None | None | I |
V/S | 0.1786 | likely_benign | 0.1353 | benign | -2.131 | Highly Destabilizing | 0.01 | N | 0.293 | neutral | None | None | None | None | I |
V/T | 0.1057 | likely_benign | 0.0885 | benign | -1.814 | Destabilizing | 0.134 | N | 0.349 | neutral | None | None | None | None | I |
V/W | 0.8128 | likely_pathogenic | 0.737 | pathogenic | -1.277 | Destabilizing | 0.984 | D | 0.557 | neutral | None | None | None | None | I |
V/Y | 0.6074 | likely_pathogenic | 0.5184 | ambiguous | -0.843 | Destabilizing | 0.942 | D | 0.443 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.