Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29428 | 88507;88508;88509 | chr2:178556872;178556871;178556870 | chr2:179421599;179421598;179421597 |
N2AB | 27787 | 83584;83585;83586 | chr2:178556872;178556871;178556870 | chr2:179421599;179421598;179421597 |
N2A | 26860 | 80803;80804;80805 | chr2:178556872;178556871;178556870 | chr2:179421599;179421598;179421597 |
N2B | 20363 | 61312;61313;61314 | chr2:178556872;178556871;178556870 | chr2:179421599;179421598;179421597 |
Novex-1 | 20488 | 61687;61688;61689 | chr2:178556872;178556871;178556870 | chr2:179421599;179421598;179421597 |
Novex-2 | 20555 | 61888;61889;61890 | chr2:178556872;178556871;178556870 | chr2:179421599;179421598;179421597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.863 | 0.347 | 0.346768085243 | gnomAD-4.0.0 | 3.1833E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71608E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1529 | likely_benign | 0.1009 | benign | -0.503 | Destabilizing | 0.999 | D | 0.834 | deleterious | N | 0.457453694 | None | None | N |
P/C | 0.667 | likely_pathogenic | 0.4754 | ambiguous | -0.727 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/D | 0.7293 | likely_pathogenic | 0.5369 | ambiguous | -0.195 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
P/E | 0.5432 | ambiguous | 0.3627 | ambiguous | -0.284 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
P/F | 0.7384 | likely_pathogenic | 0.5449 | ambiguous | -0.557 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
P/G | 0.5239 | ambiguous | 0.3666 | ambiguous | -0.663 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
P/H | 0.3939 | ambiguous | 0.2472 | benign | -0.087 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.478908023 | None | None | N |
P/I | 0.5568 | ambiguous | 0.3749 | ambiguous | -0.223 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
P/K | 0.4987 | ambiguous | 0.3293 | benign | -0.467 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
P/L | 0.2642 | likely_benign | 0.1633 | benign | -0.223 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.460977898 | None | None | N |
P/M | 0.5132 | ambiguous | 0.3624 | ambiguous | -0.408 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/N | 0.5207 | ambiguous | 0.3545 | ambiguous | -0.284 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
P/Q | 0.3114 | likely_benign | 0.1884 | benign | -0.491 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
P/R | 0.3521 | ambiguous | 0.2134 | benign | 0.051 | Stabilizing | 1.0 | D | 0.918 | deleterious | N | 0.478654533 | None | None | N |
P/S | 0.2483 | likely_benign | 0.1546 | benign | -0.694 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.460043299 | None | None | N |
P/T | 0.2081 | likely_benign | 0.1346 | benign | -0.676 | Destabilizing | 1.0 | D | 0.857 | deleterious | N | 0.50917338 | None | None | N |
P/V | 0.3891 | ambiguous | 0.2559 | benign | -0.281 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
P/W | 0.8671 | likely_pathogenic | 0.7151 | pathogenic | -0.635 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
P/Y | 0.7055 | likely_pathogenic | 0.5201 | ambiguous | -0.343 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.