Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29430 | 88513;88514;88515 | chr2:178556866;178556865;178556864 | chr2:179421593;179421592;179421591 |
N2AB | 27789 | 83590;83591;83592 | chr2:178556866;178556865;178556864 | chr2:179421593;179421592;179421591 |
N2A | 26862 | 80809;80810;80811 | chr2:178556866;178556865;178556864 | chr2:179421593;179421592;179421591 |
N2B | 20365 | 61318;61319;61320 | chr2:178556866;178556865;178556864 | chr2:179421593;179421592;179421591 |
Novex-1 | 20490 | 61693;61694;61695 | chr2:178556866;178556865;178556864 | chr2:179421593;179421592;179421591 |
Novex-2 | 20557 | 61894;61895;61896 | chr2:178556866;178556865;178556864 | chr2:179421593;179421592;179421591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1224484023 | 0.082 | 0.999 | N | 0.769 | 0.402 | 0.409398589964 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/P | None | None | 0.999 | N | 0.759 | 0.395 | 0.405012372841 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1063 | likely_benign | 0.0918 | benign | -0.774 | Destabilizing | 0.997 | D | 0.763 | deleterious | N | 0.513264983 | None | None | N |
T/C | 0.4466 | ambiguous | 0.4031 | ambiguous | -0.546 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
T/D | 0.5741 | likely_pathogenic | 0.4768 | ambiguous | -0.082 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
T/E | 0.4291 | ambiguous | 0.3556 | ambiguous | -0.079 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
T/F | 0.3315 | likely_benign | 0.2592 | benign | -0.861 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
T/G | 0.4316 | ambiguous | 0.3618 | ambiguous | -1.029 | Destabilizing | 0.999 | D | 0.663 | prob.neutral | None | None | None | None | N |
T/H | 0.3156 | likely_benign | 0.2593 | benign | -1.272 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
T/I | 0.1466 | likely_benign | 0.1212 | benign | -0.19 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.460027931 | None | None | N |
T/K | 0.2507 | likely_benign | 0.1999 | benign | -0.688 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
T/L | 0.1094 | likely_benign | 0.0944 | benign | -0.19 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | N |
T/M | 0.1039 | likely_benign | 0.0971 | benign | 0.009 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/N | 0.1722 | likely_benign | 0.1457 | benign | -0.659 | Destabilizing | 0.999 | D | 0.729 | deleterious | N | 0.484749325 | None | None | N |
T/P | 0.1712 | likely_benign | 0.1549 | benign | -0.352 | Destabilizing | 0.999 | D | 0.759 | deleterious | N | 0.519633595 | None | None | N |
T/Q | 0.2546 | likely_benign | 0.2244 | benign | -0.797 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
T/R | 0.2081 | likely_benign | 0.1629 | benign | -0.462 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
T/S | 0.1561 | likely_benign | 0.1332 | benign | -0.951 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.484242346 | None | None | N |
T/V | 0.1314 | likely_benign | 0.1132 | benign | -0.352 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
T/W | 0.7209 | likely_pathogenic | 0.6438 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
T/Y | 0.3479 | ambiguous | 0.2914 | benign | -0.559 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.