Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29448 | 88567;88568;88569 | chr2:178555117;178555116;178555115 | chr2:179419844;179419843;179419842 |
N2AB | 27807 | 83644;83645;83646 | chr2:178555117;178555116;178555115 | chr2:179419844;179419843;179419842 |
N2A | 26880 | 80863;80864;80865 | chr2:178555117;178555116;178555115 | chr2:179419844;179419843;179419842 |
N2B | 20383 | 61372;61373;61374 | chr2:178555117;178555116;178555115 | chr2:179419844;179419843;179419842 |
Novex-1 | 20508 | 61747;61748;61749 | chr2:178555117;178555116;178555115 | chr2:179419844;179419843;179419842 |
Novex-2 | 20575 | 61948;61949;61950 | chr2:178555117;178555116;178555115 | chr2:179419844;179419843;179419842 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.891 | N | 0.377 | 0.182 | 0.211220785272 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2112 | likely_benign | 0.1699 | benign | -0.122 | Destabilizing | 0.454 | N | 0.418 | neutral | N | 0.476277102 | None | None | I |
E/C | 0.9077 | likely_pathogenic | 0.8771 | pathogenic | 0.025 | Stabilizing | 0.998 | D | 0.365 | neutral | None | None | None | None | I |
E/D | 0.0893 | likely_benign | 0.0829 | benign | -0.239 | Destabilizing | 0.005 | N | 0.231 | neutral | N | 0.448821142 | None | None | I |
E/F | 0.9171 | likely_pathogenic | 0.8778 | pathogenic | -0.095 | Destabilizing | 0.991 | D | 0.375 | neutral | None | None | None | None | I |
E/G | 0.194 | likely_benign | 0.1565 | benign | -0.281 | Destabilizing | 0.625 | D | 0.393 | neutral | N | 0.480317485 | None | None | I |
E/H | 0.5344 | ambiguous | 0.4667 | ambiguous | 0.287 | Stabilizing | 0.974 | D | 0.389 | neutral | None | None | None | None | I |
E/I | 0.7248 | likely_pathogenic | 0.6395 | pathogenic | 0.246 | Stabilizing | 0.974 | D | 0.383 | neutral | None | None | None | None | I |
E/K | 0.2149 | likely_benign | 0.1644 | benign | 0.528 | Stabilizing | 0.801 | D | 0.395 | neutral | N | 0.464153167 | None | None | I |
E/L | 0.6834 | likely_pathogenic | 0.5936 | pathogenic | 0.246 | Stabilizing | 0.915 | D | 0.374 | neutral | None | None | None | None | I |
E/M | 0.6917 | likely_pathogenic | 0.6085 | pathogenic | 0.189 | Stabilizing | 0.998 | D | 0.363 | neutral | None | None | None | None | I |
E/N | 0.2279 | likely_benign | 0.1875 | benign | 0.239 | Stabilizing | 0.067 | N | 0.278 | neutral | None | None | None | None | I |
E/P | 0.8101 | likely_pathogenic | 0.7615 | pathogenic | 0.143 | Stabilizing | 0.974 | D | 0.355 | neutral | None | None | None | None | I |
E/Q | 0.1994 | likely_benign | 0.1673 | benign | 0.264 | Stabilizing | 0.891 | D | 0.377 | neutral | N | 0.442836532 | None | None | I |
E/R | 0.359 | ambiguous | 0.2899 | benign | 0.703 | Stabilizing | 0.974 | D | 0.367 | neutral | None | None | None | None | I |
E/S | 0.217 | likely_benign | 0.176 | benign | 0.099 | Stabilizing | 0.08 | N | 0.23 | neutral | None | None | None | None | I |
E/T | 0.2932 | likely_benign | 0.2349 | benign | 0.233 | Stabilizing | 0.728 | D | 0.405 | neutral | None | None | None | None | I |
E/V | 0.4471 | ambiguous | 0.3718 | ambiguous | 0.143 | Stabilizing | 0.891 | D | 0.383 | neutral | N | 0.491707914 | None | None | I |
E/W | 0.9566 | likely_pathogenic | 0.934 | pathogenic | -0.004 | Destabilizing | 0.998 | D | 0.449 | neutral | None | None | None | None | I |
E/Y | 0.7994 | likely_pathogenic | 0.7317 | pathogenic | 0.145 | Stabilizing | 0.991 | D | 0.379 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.