Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29449 | 88570;88571;88572 | chr2:178555114;178555113;178555112 | chr2:179419841;179419840;179419839 |
N2AB | 27808 | 83647;83648;83649 | chr2:178555114;178555113;178555112 | chr2:179419841;179419840;179419839 |
N2A | 26881 | 80866;80867;80868 | chr2:178555114;178555113;178555112 | chr2:179419841;179419840;179419839 |
N2B | 20384 | 61375;61376;61377 | chr2:178555114;178555113;178555112 | chr2:179419841;179419840;179419839 |
Novex-1 | 20509 | 61750;61751;61752 | chr2:178555114;178555113;178555112 | chr2:179419841;179419840;179419839 |
Novex-2 | 20576 | 61951;61952;61953 | chr2:178555114;178555113;178555112 | chr2:179419841;179419840;179419839 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.97 | N | 0.471 | 0.321 | 0.518641613453 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1523 | likely_benign | 0.1261 | benign | -1.013 | Destabilizing | 0.489 | N | 0.434 | neutral | N | 0.443489893 | None | None | N |
V/C | 0.7711 | likely_pathogenic | 0.7121 | pathogenic | -0.795 | Destabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | N |
V/D | 0.3309 | likely_benign | 0.2663 | benign | -0.668 | Destabilizing | 0.698 | D | 0.506 | neutral | N | 0.35500133 | None | None | N |
V/E | 0.2789 | likely_benign | 0.2371 | benign | -0.744 | Destabilizing | 0.076 | N | 0.325 | neutral | None | None | None | None | N |
V/F | 0.2287 | likely_benign | 0.1774 | benign | -0.922 | Destabilizing | 0.97 | D | 0.471 | neutral | N | 0.473639441 | None | None | N |
V/G | 0.2479 | likely_benign | 0.2061 | benign | -1.228 | Destabilizing | 0.822 | D | 0.509 | neutral | N | 0.429405875 | None | None | N |
V/H | 0.6738 | likely_pathogenic | 0.5801 | pathogenic | -0.694 | Destabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | N |
V/I | 0.0811 | likely_benign | 0.0746 | benign | -0.569 | Destabilizing | 0.822 | D | 0.452 | neutral | N | 0.454784322 | None | None | N |
V/K | 0.4358 | ambiguous | 0.3525 | ambiguous | -0.875 | Destabilizing | 0.86 | D | 0.477 | neutral | None | None | None | None | N |
V/L | 0.2539 | likely_benign | 0.2035 | benign | -0.569 | Destabilizing | 0.489 | N | 0.467 | neutral | N | 0.462249012 | None | None | N |
V/M | 0.1406 | likely_benign | 0.1163 | benign | -0.487 | Destabilizing | 0.978 | D | 0.441 | neutral | None | None | None | None | N |
V/N | 0.289 | likely_benign | 0.219 | benign | -0.584 | Destabilizing | 0.956 | D | 0.571 | neutral | None | None | None | None | N |
V/P | 0.5438 | ambiguous | 0.446 | ambiguous | -0.681 | Destabilizing | 0.978 | D | 0.538 | neutral | None | None | None | None | N |
V/Q | 0.4327 | ambiguous | 0.3563 | ambiguous | -0.834 | Destabilizing | 0.956 | D | 0.537 | neutral | None | None | None | None | N |
V/R | 0.4588 | ambiguous | 0.3576 | ambiguous | -0.291 | Destabilizing | 0.956 | D | 0.585 | neutral | None | None | None | None | N |
V/S | 0.2465 | likely_benign | 0.1937 | benign | -1.034 | Destabilizing | 0.754 | D | 0.48 | neutral | None | None | None | None | N |
V/T | 0.133 | likely_benign | 0.1137 | benign | -1.009 | Destabilizing | 0.019 | N | 0.274 | neutral | None | None | None | None | N |
V/W | 0.8177 | likely_pathogenic | 0.7405 | pathogenic | -0.993 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | N |
V/Y | 0.5616 | ambiguous | 0.4822 | ambiguous | -0.732 | Destabilizing | 0.993 | D | 0.477 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.