Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2945 | 9058;9059;9060 | chr2:178769748;178769747;178769746 | chr2:179634475;179634474;179634473 |
N2AB | 2945 | 9058;9059;9060 | chr2:178769748;178769747;178769746 | chr2:179634475;179634474;179634473 |
N2A | 2945 | 9058;9059;9060 | chr2:178769748;178769747;178769746 | chr2:179634475;179634474;179634473 |
N2B | 2899 | 8920;8921;8922 | chr2:178769748;178769747;178769746 | chr2:179634475;179634474;179634473 |
Novex-1 | 2899 | 8920;8921;8922 | chr2:178769748;178769747;178769746 | chr2:179634475;179634474;179634473 |
Novex-2 | 2899 | 8920;8921;8922 | chr2:178769748;178769747;178769746 | chr2:179634475;179634474;179634473 |
Novex-3 | 2945 | 9058;9059;9060 | chr2:178769748;178769747;178769746 | chr2:179634475;179634474;179634473 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.005 | N | 0.128 | 0.105 | 0.139678290688 | gnomAD-4.0.0 | 3.18102E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.76393E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0658 | likely_benign | 0.0683 | benign | -0.59 | Destabilizing | 0.005 | N | 0.128 | neutral | N | 0.409391829 | None | None | N |
T/C | 0.3026 | likely_benign | 0.4044 | ambiguous | -0.281 | Destabilizing | 0.676 | D | 0.207 | neutral | None | None | None | None | N |
T/D | 0.32 | likely_benign | 0.3544 | ambiguous | -0.082 | Destabilizing | 0.038 | N | 0.261 | neutral | None | None | None | None | N |
T/E | 0.2521 | likely_benign | 0.2454 | benign | -0.156 | Destabilizing | 0.016 | N | 0.271 | neutral | None | None | None | None | N |
T/F | 0.2318 | likely_benign | 0.249 | benign | -1.04 | Destabilizing | 0.356 | N | 0.252 | neutral | None | None | None | None | N |
T/G | 0.171 | likely_benign | 0.2084 | benign | -0.733 | Destabilizing | 0.016 | N | 0.247 | neutral | None | None | None | None | N |
T/H | 0.2384 | likely_benign | 0.2592 | benign | -1.098 | Destabilizing | 0.356 | N | 0.239 | neutral | None | None | None | None | N |
T/I | 0.1374 | likely_benign | 0.1413 | benign | -0.323 | Destabilizing | 0.055 | N | 0.285 | neutral | N | 0.462689649 | None | None | N |
T/K | 0.1916 | likely_benign | 0.1816 | benign | -0.467 | Destabilizing | None | N | 0.123 | neutral | N | 0.364723941 | None | None | N |
T/L | 0.0833 | likely_benign | 0.0862 | benign | -0.323 | Destabilizing | 0.031 | N | 0.259 | neutral | None | None | None | None | N |
T/M | 0.0868 | likely_benign | 0.087 | benign | 0.098 | Stabilizing | 0.628 | D | 0.204 | neutral | None | None | None | None | N |
T/N | 0.1118 | likely_benign | 0.1241 | benign | -0.217 | Destabilizing | 0.016 | N | 0.155 | neutral | None | None | None | None | N |
T/P | 0.098 | likely_benign | 0.1017 | benign | -0.384 | Destabilizing | 0.055 | N | 0.31 | neutral | N | 0.37000517 | None | None | N |
T/Q | 0.207 | likely_benign | 0.2011 | benign | -0.54 | Destabilizing | 0.072 | N | 0.259 | neutral | None | None | None | None | N |
T/R | 0.1594 | likely_benign | 0.1469 | benign | -0.141 | Destabilizing | None | N | 0.125 | neutral | N | 0.407431069 | None | None | N |
T/S | 0.0743 | likely_benign | 0.0925 | benign | -0.458 | Destabilizing | None | N | 0.092 | neutral | N | 0.404216078 | None | None | N |
T/V | 0.1164 | likely_benign | 0.1173 | benign | -0.384 | Destabilizing | 0.072 | N | 0.145 | neutral | None | None | None | None | N |
T/W | 0.5201 | ambiguous | 0.5863 | pathogenic | -0.969 | Destabilizing | 0.864 | D | 0.248 | neutral | None | None | None | None | N |
T/Y | 0.2607 | likely_benign | 0.3087 | benign | -0.717 | Destabilizing | 0.356 | N | 0.255 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.