Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29456 | 88591;88592;88593 | chr2:178555093;178555092;178555091 | chr2:179419820;179419819;179419818 |
N2AB | 27815 | 83668;83669;83670 | chr2:178555093;178555092;178555091 | chr2:179419820;179419819;179419818 |
N2A | 26888 | 80887;80888;80889 | chr2:178555093;178555092;178555091 | chr2:179419820;179419819;179419818 |
N2B | 20391 | 61396;61397;61398 | chr2:178555093;178555092;178555091 | chr2:179419820;179419819;179419818 |
Novex-1 | 20516 | 61771;61772;61773 | chr2:178555093;178555092;178555091 | chr2:179419820;179419819;179419818 |
Novex-2 | 20583 | 61972;61973;61974 | chr2:178555093;178555092;178555091 | chr2:179419820;179419819;179419818 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1468721085 | -0.529 | 0.934 | N | 0.358 | 0.273 | 0.265929055128 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1468721085 | -0.529 | 0.934 | N | 0.358 | 0.273 | 0.265929055128 | gnomAD-4.0.0 | 1.85916E-06 | None | None | None | None | N | None | 1.33515E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69523E-06 | 0 | 0 |
T/R | rs1468721085 | None | 0.966 | N | 0.378 | 0.375 | 0.284539287134 | gnomAD-4.0.0 | 1.36844E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79895E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.086 | likely_benign | 0.0844 | benign | -0.95 | Destabilizing | 0.005 | N | 0.205 | neutral | N | 0.431176743 | None | None | N |
T/C | 0.403 | ambiguous | 0.416 | ambiguous | -0.485 | Destabilizing | 0.998 | D | 0.363 | neutral | None | None | None | None | N |
T/D | 0.3311 | likely_benign | 0.3395 | benign | 0.181 | Stabilizing | 0.842 | D | 0.382 | neutral | None | None | None | None | N |
T/E | 0.2737 | likely_benign | 0.2811 | benign | 0.152 | Stabilizing | 0.842 | D | 0.326 | neutral | None | None | None | None | N |
T/F | 0.3014 | likely_benign | 0.2886 | benign | -1.295 | Destabilizing | 0.991 | D | 0.458 | neutral | None | None | None | None | N |
T/G | 0.2346 | likely_benign | 0.2426 | benign | -1.146 | Destabilizing | 0.525 | D | 0.371 | neutral | None | None | None | None | N |
T/H | 0.2877 | likely_benign | 0.2808 | benign | -1.468 | Destabilizing | 0.998 | D | 0.443 | neutral | None | None | None | None | N |
T/I | 0.2433 | likely_benign | 0.2377 | benign | -0.53 | Destabilizing | 0.934 | D | 0.358 | neutral | N | 0.484472511 | None | None | N |
T/K | 0.2338 | likely_benign | 0.2336 | benign | -0.508 | Destabilizing | 0.801 | D | 0.339 | neutral | N | 0.434350335 | None | None | N |
T/L | 0.1361 | likely_benign | 0.135 | benign | -0.53 | Destabilizing | 0.842 | D | 0.323 | neutral | None | None | None | None | N |
T/M | 0.1095 | likely_benign | 0.1015 | benign | -0.121 | Destabilizing | 0.991 | D | 0.365 | neutral | None | None | None | None | N |
T/N | 0.1214 | likely_benign | 0.1238 | benign | -0.364 | Destabilizing | 0.842 | D | 0.371 | neutral | None | None | None | None | N |
T/P | 0.6078 | likely_pathogenic | 0.5986 | pathogenic | -0.64 | Destabilizing | 0.966 | D | 0.371 | neutral | N | 0.484125794 | None | None | N |
T/Q | 0.2219 | likely_benign | 0.2243 | benign | -0.58 | Destabilizing | 0.974 | D | 0.385 | neutral | None | None | None | None | N |
T/R | 0.223 | likely_benign | 0.2205 | benign | -0.288 | Destabilizing | 0.966 | D | 0.378 | neutral | N | 0.446260839 | None | None | N |
T/S | 0.1012 | likely_benign | 0.0999 | benign | -0.716 | Destabilizing | 0.062 | N | 0.232 | neutral | N | 0.37072293 | None | None | N |
T/V | 0.1753 | likely_benign | 0.1723 | benign | -0.64 | Destabilizing | 0.728 | D | 0.328 | neutral | None | None | None | None | N |
T/W | 0.6993 | likely_pathogenic | 0.6844 | pathogenic | -1.174 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
T/Y | 0.32 | likely_benign | 0.3304 | benign | -0.938 | Destabilizing | 0.991 | D | 0.456 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.