Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29457 | 88594;88595;88596 | chr2:178555090;178555089;178555088 | chr2:179419817;179419816;179419815 |
N2AB | 27816 | 83671;83672;83673 | chr2:178555090;178555089;178555088 | chr2:179419817;179419816;179419815 |
N2A | 26889 | 80890;80891;80892 | chr2:178555090;178555089;178555088 | chr2:179419817;179419816;179419815 |
N2B | 20392 | 61399;61400;61401 | chr2:178555090;178555089;178555088 | chr2:179419817;179419816;179419815 |
Novex-1 | 20517 | 61774;61775;61776 | chr2:178555090;178555089;178555088 | chr2:179419817;179419816;179419815 |
Novex-2 | 20584 | 61975;61976;61977 | chr2:178555090;178555089;178555088 | chr2:179419817;179419816;179419815 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1436729159 | None | 0.016 | N | 0.167 | 0.064 | 0.124217242631 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92901E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs1436729159 | None | 0.016 | N | 0.167 | 0.064 | 0.124217242631 | gnomAD-4.0.0 | 6.5722E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.92901E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0665 | likely_benign | 0.066 | benign | -0.592 | Destabilizing | 0.002 | N | 0.145 | neutral | N | 0.476701176 | None | None | N |
S/C | 0.1234 | likely_benign | 0.125 | benign | -0.404 | Destabilizing | 0.97 | D | 0.399 | neutral | N | 0.472901451 | None | None | N |
S/D | 0.4352 | ambiguous | 0.4223 | ambiguous | 0.464 | Stabilizing | 0.002 | N | 0.143 | neutral | None | None | None | None | N |
S/E | 0.5586 | ambiguous | 0.5594 | ambiguous | 0.426 | Stabilizing | 0.25 | N | 0.32 | neutral | None | None | None | None | N |
S/F | 0.275 | likely_benign | 0.2568 | benign | -0.992 | Destabilizing | 0.896 | D | 0.439 | neutral | N | 0.472647961 | None | None | N |
S/G | 0.1143 | likely_benign | 0.1173 | benign | -0.778 | Destabilizing | 0.25 | N | 0.35 | neutral | None | None | None | None | N |
S/H | 0.4362 | ambiguous | 0.4393 | ambiguous | -1.19 | Destabilizing | 0.92 | D | 0.405 | neutral | None | None | None | None | N |
S/I | 0.1772 | likely_benign | 0.1822 | benign | -0.219 | Destabilizing | 0.85 | D | 0.461 | neutral | None | None | None | None | N |
S/K | 0.7343 | likely_pathogenic | 0.719 | pathogenic | -0.396 | Destabilizing | 0.617 | D | 0.296 | neutral | None | None | None | None | N |
S/L | 0.1142 | likely_benign | 0.109 | benign | -0.219 | Destabilizing | 0.447 | N | 0.442 | neutral | None | None | None | None | N |
S/M | 0.1988 | likely_benign | 0.2025 | benign | -0.06 | Destabilizing | 0.972 | D | 0.404 | neutral | None | None | None | None | N |
S/N | 0.1504 | likely_benign | 0.1594 | benign | -0.277 | Destabilizing | 0.021 | N | 0.188 | neutral | None | None | None | None | N |
S/P | 0.1414 | likely_benign | 0.1455 | benign | -0.312 | Destabilizing | 0.712 | D | 0.449 | neutral | N | 0.440375017 | None | None | N |
S/Q | 0.5458 | ambiguous | 0.5503 | ambiguous | -0.419 | Destabilizing | 0.92 | D | 0.379 | neutral | None | None | None | None | N |
S/R | 0.6749 | likely_pathogenic | 0.6525 | pathogenic | -0.295 | Destabilizing | 0.85 | D | 0.445 | neutral | None | None | None | None | N |
S/T | 0.0771 | likely_benign | 0.0768 | benign | -0.392 | Destabilizing | 0.016 | N | 0.167 | neutral | N | 0.44599148 | None | None | N |
S/V | 0.1538 | likely_benign | 0.1546 | benign | -0.312 | Destabilizing | 0.447 | N | 0.429 | neutral | None | None | None | None | N |
S/W | 0.4459 | ambiguous | 0.3996 | ambiguous | -0.958 | Destabilizing | 0.992 | D | 0.557 | neutral | None | None | None | None | N |
S/Y | 0.2526 | likely_benign | 0.2357 | benign | -0.678 | Destabilizing | 0.963 | D | 0.433 | neutral | N | 0.472647961 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.