Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29458 | 88597;88598;88599 | chr2:178555087;178555086;178555085 | chr2:179419814;179419813;179419812 |
N2AB | 27817 | 83674;83675;83676 | chr2:178555087;178555086;178555085 | chr2:179419814;179419813;179419812 |
N2A | 26890 | 80893;80894;80895 | chr2:178555087;178555086;178555085 | chr2:179419814;179419813;179419812 |
N2B | 20393 | 61402;61403;61404 | chr2:178555087;178555086;178555085 | chr2:179419814;179419813;179419812 |
Novex-1 | 20518 | 61777;61778;61779 | chr2:178555087;178555086;178555085 | chr2:179419814;179419813;179419812 |
Novex-2 | 20585 | 61978;61979;61980 | chr2:178555087;178555086;178555085 | chr2:179419814;179419813;179419812 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1575553466 | None | 0.898 | N | 0.535 | 0.131 | 0.36256342048 | gnomAD-4.0.0 | 3.60099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.09898E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6886 | likely_pathogenic | 0.661 | pathogenic | -1.503 | Destabilizing | 0.977 | D | 0.545 | neutral | N | 0.500866115 | None | None | N |
V/C | 0.8758 | likely_pathogenic | 0.8821 | pathogenic | -1.149 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/D | 0.9894 | likely_pathogenic | 0.9892 | pathogenic | -0.996 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
V/E | 0.9748 | likely_pathogenic | 0.9712 | pathogenic | -0.839 | Destabilizing | 0.999 | D | 0.816 | deleterious | N | 0.499492083 | None | None | N |
V/F | 0.4365 | ambiguous | 0.4136 | ambiguous | -0.826 | Destabilizing | 0.995 | D | 0.837 | deleterious | None | None | None | None | N |
V/G | 0.8435 | likely_pathogenic | 0.8334 | pathogenic | -1.978 | Destabilizing | 0.999 | D | 0.834 | deleterious | N | 0.487971194 | None | None | N |
V/H | 0.9879 | likely_pathogenic | 0.9854 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/I | 0.0848 | likely_benign | 0.0865 | benign | -0.234 | Destabilizing | 0.15 | N | 0.273 | neutral | None | None | None | None | N |
V/K | 0.9706 | likely_pathogenic | 0.9639 | pathogenic | -1.095 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
V/L | 0.3091 | likely_benign | 0.308 | benign | -0.234 | Destabilizing | 0.898 | D | 0.535 | neutral | N | 0.47850933 | None | None | N |
V/M | 0.3484 | ambiguous | 0.3336 | benign | -0.336 | Destabilizing | 0.993 | D | 0.776 | deleterious | N | 0.499238594 | None | None | N |
V/N | 0.9726 | likely_pathogenic | 0.9724 | pathogenic | -1.241 | Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
V/P | 0.9819 | likely_pathogenic | 0.9796 | pathogenic | -0.624 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
V/Q | 0.963 | likely_pathogenic | 0.957 | pathogenic | -1.127 | Destabilizing | 0.999 | D | 0.851 | deleterious | None | None | None | None | N |
V/R | 0.9526 | likely_pathogenic | 0.9427 | pathogenic | -0.92 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/S | 0.9218 | likely_pathogenic | 0.9186 | pathogenic | -1.979 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
V/T | 0.8251 | likely_pathogenic | 0.8191 | pathogenic | -1.664 | Destabilizing | 0.983 | D | 0.658 | neutral | None | None | None | None | N |
V/W | 0.9812 | likely_pathogenic | 0.9748 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/Y | 0.9377 | likely_pathogenic | 0.9284 | pathogenic | -0.749 | Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.