Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29460 | 88603;88604;88605 | chr2:178555081;178555080;178555079 | chr2:179419808;179419807;179419806 |
N2AB | 27819 | 83680;83681;83682 | chr2:178555081;178555080;178555079 | chr2:179419808;179419807;179419806 |
N2A | 26892 | 80899;80900;80901 | chr2:178555081;178555080;178555079 | chr2:179419808;179419807;179419806 |
N2B | 20395 | 61408;61409;61410 | chr2:178555081;178555080;178555079 | chr2:179419808;179419807;179419806 |
Novex-1 | 20520 | 61783;61784;61785 | chr2:178555081;178555080;178555079 | chr2:179419808;179419807;179419806 |
Novex-2 | 20587 | 61984;61985;61986 | chr2:178555081;178555080;178555079 | chr2:179419808;179419807;179419806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.884 | D | 0.345 | 0.329 | 0.624915994163 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85793E-06 | 0 | 0 |
L/P | rs1273946474 | None | 1.0 | D | 0.893 | 0.881 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs1273946474 | None | 1.0 | D | 0.893 | 0.881 | None | gnomAD-4.0.0 | 6.57134E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9718 | likely_pathogenic | 0.9665 | pathogenic | -1.609 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
L/C | 0.9543 | likely_pathogenic | 0.948 | pathogenic | -1.263 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/D | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -2.434 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/E | 0.9943 | likely_pathogenic | 0.9939 | pathogenic | -2.18 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.5052 | ambiguous | 0.4448 | ambiguous | -1.168 | Destabilizing | 0.999 | D | 0.781 | deleterious | D | 0.527152292 | None | None | N |
L/G | 0.9928 | likely_pathogenic | 0.9911 | pathogenic | -2.057 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/H | 0.9875 | likely_pathogenic | 0.9858 | pathogenic | -2.111 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.599200462 | None | None | N |
L/I | 0.1319 | likely_benign | 0.1258 | benign | -0.278 | Destabilizing | 0.884 | D | 0.345 | neutral | D | 0.55897489 | None | None | N |
L/K | 0.9877 | likely_pathogenic | 0.9875 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/M | 0.3105 | likely_benign | 0.2902 | benign | -0.583 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/N | 0.9961 | likely_pathogenic | 0.9957 | pathogenic | -2.005 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/P | 0.992 | likely_pathogenic | 0.9894 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.599200462 | None | None | N |
L/Q | 0.9824 | likely_pathogenic | 0.9792 | pathogenic | -1.629 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/R | 0.9812 | likely_pathogenic | 0.979 | pathogenic | -1.751 | Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.599200462 | None | None | N |
L/S | 0.9966 | likely_pathogenic | 0.9957 | pathogenic | -2.372 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/T | 0.9864 | likely_pathogenic | 0.9844 | pathogenic | -1.973 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
L/V | 0.2976 | likely_benign | 0.2756 | benign | -0.713 | Destabilizing | 0.981 | D | 0.649 | neutral | D | 0.552919333 | None | None | N |
L/W | 0.9067 | likely_pathogenic | 0.8844 | pathogenic | -1.502 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/Y | 0.9382 | likely_pathogenic | 0.9238 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.