Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29461 | 88606;88607;88608 | chr2:178555078;178555077;178555076 | chr2:179419805;179419804;179419803 |
N2AB | 27820 | 83683;83684;83685 | chr2:178555078;178555077;178555076 | chr2:179419805;179419804;179419803 |
N2A | 26893 | 80902;80903;80904 | chr2:178555078;178555077;178555076 | chr2:179419805;179419804;179419803 |
N2B | 20396 | 61411;61412;61413 | chr2:178555078;178555077;178555076 | chr2:179419805;179419804;179419803 |
Novex-1 | 20521 | 61786;61787;61788 | chr2:178555078;178555077;178555076 | chr2:179419805;179419804;179419803 |
Novex-2 | 20588 | 61987;61988;61989 | chr2:178555078;178555077;178555076 | chr2:179419805;179419804;179419803 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.801 | N | 0.505 | 0.269 | 0.388970301349 | gnomAD-4.0.0 | 2.40067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62503E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3099 | likely_benign | 0.2804 | benign | -0.35 | Destabilizing | 0.688 | D | 0.516 | neutral | None | None | None | None | N |
R/C | 0.1439 | likely_benign | 0.1421 | benign | -0.444 | Destabilizing | 0.998 | D | 0.573 | neutral | None | None | None | None | N |
R/D | 0.6303 | likely_pathogenic | 0.5927 | pathogenic | 0.096 | Stabilizing | 0.842 | D | 0.545 | neutral | None | None | None | None | N |
R/E | 0.3001 | likely_benign | 0.2806 | benign | 0.196 | Stabilizing | 0.525 | D | 0.478 | neutral | None | None | None | None | N |
R/F | 0.4542 | ambiguous | 0.4065 | ambiguous | -0.412 | Destabilizing | 0.991 | D | 0.595 | neutral | None | None | None | None | N |
R/G | 0.2643 | likely_benign | 0.2401 | benign | -0.601 | Destabilizing | 0.801 | D | 0.547 | neutral | N | 0.493135719 | None | None | N |
R/H | 0.0967 | likely_benign | 0.093 | benign | -1.023 | Destabilizing | 0.991 | D | 0.538 | neutral | None | None | None | None | N |
R/I | 0.1905 | likely_benign | 0.177 | benign | 0.295 | Stabilizing | 0.966 | D | 0.599 | neutral | N | 0.493482436 | None | None | N |
R/K | 0.0912 | likely_benign | 0.0897 | benign | -0.317 | Destabilizing | 0.002 | N | 0.179 | neutral | N | 0.409517045 | None | None | N |
R/L | 0.1875 | likely_benign | 0.168 | benign | 0.295 | Stabilizing | 0.842 | D | 0.547 | neutral | None | None | None | None | N |
R/M | 0.1946 | likely_benign | 0.1846 | benign | -0.139 | Destabilizing | 0.991 | D | 0.573 | neutral | None | None | None | None | N |
R/N | 0.4966 | ambiguous | 0.4579 | ambiguous | None | Stabilizing | 0.842 | D | 0.435 | neutral | None | None | None | None | N |
R/P | 0.742 | likely_pathogenic | 0.7105 | pathogenic | 0.101 | Stabilizing | 0.915 | D | 0.594 | neutral | None | None | None | None | N |
R/Q | 0.0928 | likely_benign | 0.0913 | benign | -0.115 | Destabilizing | 0.842 | D | 0.441 | neutral | None | None | None | None | N |
R/S | 0.3699 | ambiguous | 0.3315 | benign | -0.585 | Destabilizing | 0.625 | D | 0.515 | neutral | N | 0.437261007 | None | None | N |
R/T | 0.1499 | likely_benign | 0.1378 | benign | -0.319 | Destabilizing | 0.801 | D | 0.505 | neutral | N | 0.440511955 | None | None | N |
R/V | 0.2467 | likely_benign | 0.2263 | benign | 0.101 | Stabilizing | 0.915 | D | 0.573 | neutral | None | None | None | None | N |
R/W | 0.1668 | likely_benign | 0.159 | benign | -0.29 | Destabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
R/Y | 0.3413 | ambiguous | 0.3028 | benign | 0.076 | Stabilizing | 0.991 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.