Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29464 | 88615;88616;88617 | chr2:178555069;178555068;178555067 | chr2:179419796;179419795;179419794 |
N2AB | 27823 | 83692;83693;83694 | chr2:178555069;178555068;178555067 | chr2:179419796;179419795;179419794 |
N2A | 26896 | 80911;80912;80913 | chr2:178555069;178555068;178555067 | chr2:179419796;179419795;179419794 |
N2B | 20399 | 61420;61421;61422 | chr2:178555069;178555068;178555067 | chr2:179419796;179419795;179419794 |
Novex-1 | 20524 | 61795;61796;61797 | chr2:178555069;178555068;178555067 | chr2:179419796;179419795;179419794 |
Novex-2 | 20591 | 61996;61997;61998 | chr2:178555069;178555068;178555067 | chr2:179419796;179419795;179419794 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1700847616 | None | 0.993 | D | 0.413 | 0.462 | 0.687289144923 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 0 | 0 | 0 |
I/L | rs1700847616 | None | 0.993 | D | 0.413 | 0.462 | 0.687289144923 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.4162E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8874 | likely_pathogenic | 0.8888 | pathogenic | -1.144 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
I/C | 0.8709 | likely_pathogenic | 0.8774 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
I/D | 0.9938 | likely_pathogenic | 0.9937 | pathogenic | 0.291 | Stabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
I/E | 0.9861 | likely_pathogenic | 0.986 | pathogenic | 0.308 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/F | 0.2847 | likely_benign | 0.2846 | benign | -0.697 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.470995152 | None | None | N |
I/G | 0.976 | likely_pathogenic | 0.9755 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
I/H | 0.9488 | likely_pathogenic | 0.9488 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/K | 0.9385 | likely_pathogenic | 0.9337 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
I/L | 0.2695 | likely_benign | 0.2601 | benign | -0.442 | Destabilizing | 0.993 | D | 0.413 | neutral | D | 0.523192054 | None | None | N |
I/M | 0.2738 | likely_benign | 0.2739 | benign | -0.638 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.505298884 | None | None | N |
I/N | 0.905 | likely_pathogenic | 0.8972 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.505805863 | None | None | N |
I/P | 0.9856 | likely_pathogenic | 0.9874 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/Q | 0.9588 | likely_pathogenic | 0.958 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/R | 0.9148 | likely_pathogenic | 0.9112 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
I/S | 0.8958 | likely_pathogenic | 0.8934 | pathogenic | -1.286 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.538142864 | None | None | N |
I/T | 0.8547 | likely_pathogenic | 0.8498 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.529291307 | None | None | N |
I/V | 0.1334 | likely_benign | 0.1345 | benign | -0.644 | Destabilizing | 0.993 | D | 0.368 | neutral | N | 0.404969656 | None | None | N |
I/W | 0.9487 | likely_pathogenic | 0.9479 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
I/Y | 0.7596 | likely_pathogenic | 0.746 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.