Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29473 | 88642;88643;88644 | chr2:178555042;178555041;178555040 | chr2:179419769;179419768;179419767 |
N2AB | 27832 | 83719;83720;83721 | chr2:178555042;178555041;178555040 | chr2:179419769;179419768;179419767 |
N2A | 26905 | 80938;80939;80940 | chr2:178555042;178555041;178555040 | chr2:179419769;179419768;179419767 |
N2B | 20408 | 61447;61448;61449 | chr2:178555042;178555041;178555040 | chr2:179419769;179419768;179419767 |
Novex-1 | 20533 | 61822;61823;61824 | chr2:178555042;178555041;178555040 | chr2:179419769;179419768;179419767 |
Novex-2 | 20600 | 62023;62024;62025 | chr2:178555042;178555041;178555040 | chr2:179419769;179419768;179419767 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1575552905 | None | 0.999 | D | 0.511 | 0.229 | 0.266843984389 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1575552905 | None | 0.999 | D | 0.511 | 0.229 | 0.266843984389 | gnomAD-4.0.0 | 2.56232E-06 | None | None | None | None | N | None | 0 | 1.69492E-05 | None | 0 | 0 | None | 0 | 0 | 2.39275E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2043 | likely_benign | 0.1789 | benign | -0.653 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | N | 0.49194364 | None | None | N |
E/C | 0.826 | likely_pathogenic | 0.8153 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/D | 0.3189 | likely_benign | 0.2964 | benign | -1.287 | Destabilizing | 0.999 | D | 0.511 | neutral | D | 0.522093189 | None | None | N |
E/F | 0.7936 | likely_pathogenic | 0.7536 | pathogenic | 0.134 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
E/G | 0.3661 | ambiguous | 0.3171 | benign | -1.069 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.487102043 | None | None | N |
E/H | 0.536 | ambiguous | 0.4886 | ambiguous | -0.19 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/I | 0.3533 | ambiguous | 0.3286 | benign | 0.498 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
E/K | 0.2315 | likely_benign | 0.1922 | benign | -0.907 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.44805679 | None | None | N |
E/L | 0.4847 | ambiguous | 0.4393 | ambiguous | 0.498 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
E/M | 0.4823 | ambiguous | 0.4466 | ambiguous | 0.896 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/N | 0.4887 | ambiguous | 0.4498 | ambiguous | -1.449 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/P | 0.9901 | likely_pathogenic | 0.9887 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Q | 0.1472 | likely_benign | 0.1307 | benign | -1.23 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.467162626 | None | None | N |
E/R | 0.3658 | ambiguous | 0.3137 | benign | -0.572 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/S | 0.2761 | likely_benign | 0.2459 | benign | -1.784 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
E/T | 0.2328 | likely_benign | 0.2143 | benign | -1.435 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/V | 0.2218 | likely_benign | 0.2084 | benign | 0.136 | Stabilizing | 1.0 | D | 0.773 | deleterious | N | 0.471723084 | None | None | N |
E/W | 0.9351 | likely_pathogenic | 0.9181 | pathogenic | 0.328 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/Y | 0.7386 | likely_pathogenic | 0.6943 | pathogenic | 0.356 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.