Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29476 | 88651;88652;88653 | chr2:178555033;178555032;178555031 | chr2:179419760;179419759;179419758 |
N2AB | 27835 | 83728;83729;83730 | chr2:178555033;178555032;178555031 | chr2:179419760;179419759;179419758 |
N2A | 26908 | 80947;80948;80949 | chr2:178555033;178555032;178555031 | chr2:179419760;179419759;179419758 |
N2B | 20411 | 61456;61457;61458 | chr2:178555033;178555032;178555031 | chr2:179419760;179419759;179419758 |
Novex-1 | 20536 | 61831;61832;61833 | chr2:178555033;178555032;178555031 | chr2:179419760;179419759;179419758 |
Novex-2 | 20603 | 62032;62033;62034 | chr2:178555033;178555032;178555031 | chr2:179419760;179419759;179419758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.235 | N | 0.355 | 0.2 | 0.202949470691 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9249 | likely_pathogenic | 0.8924 | pathogenic | -0.912 | Destabilizing | 0.983 | D | 0.546 | neutral | None | None | None | None | N |
K/C | 0.8415 | likely_pathogenic | 0.8249 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
K/D | 0.9898 | likely_pathogenic | 0.9861 | pathogenic | -0.206 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/E | 0.8176 | likely_pathogenic | 0.7607 | pathogenic | -0.067 | Destabilizing | 0.977 | D | 0.509 | neutral | N | 0.511345822 | None | None | N |
K/F | 0.9536 | likely_pathogenic | 0.9475 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/G | 0.963 | likely_pathogenic | 0.9508 | pathogenic | -1.293 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | N |
K/H | 0.5727 | likely_pathogenic | 0.581 | pathogenic | -1.661 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
K/I | 0.7946 | likely_pathogenic | 0.7356 | pathogenic | 0.091 | Stabilizing | 0.997 | D | 0.801 | deleterious | N | 0.510078374 | None | None | N |
K/L | 0.7701 | likely_pathogenic | 0.7229 | pathogenic | 0.091 | Stabilizing | 0.995 | D | 0.672 | neutral | None | None | None | None | N |
K/M | 0.6532 | likely_pathogenic | 0.5913 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
K/N | 0.9595 | likely_pathogenic | 0.9479 | pathogenic | -0.644 | Destabilizing | 0.993 | D | 0.641 | neutral | N | 0.511092332 | None | None | N |
K/P | 0.9966 | likely_pathogenic | 0.9947 | pathogenic | -0.215 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
K/Q | 0.4257 | ambiguous | 0.3806 | ambiguous | -0.705 | Destabilizing | 0.993 | D | 0.619 | neutral | N | 0.510585353 | None | None | N |
K/R | 0.0892 | likely_benign | 0.0893 | benign | -0.694 | Destabilizing | 0.235 | N | 0.355 | neutral | N | 0.500868902 | None | None | N |
K/S | 0.9541 | likely_pathogenic | 0.9366 | pathogenic | -1.409 | Destabilizing | 0.983 | D | 0.567 | neutral | None | None | None | None | N |
K/T | 0.839 | likely_pathogenic | 0.7908 | pathogenic | -1.047 | Destabilizing | 0.997 | D | 0.67 | neutral | N | 0.499482538 | None | None | N |
K/V | 0.7735 | likely_pathogenic | 0.7153 | pathogenic | -0.215 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/W | 0.9192 | likely_pathogenic | 0.9143 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
K/Y | 0.8716 | likely_pathogenic | 0.8723 | pathogenic | -0.16 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.