Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29479 | 88660;88661;88662 | chr2:178555024;178555023;178555022 | chr2:179419751;179419750;179419749 |
N2AB | 27838 | 83737;83738;83739 | chr2:178555024;178555023;178555022 | chr2:179419751;179419750;179419749 |
N2A | 26911 | 80956;80957;80958 | chr2:178555024;178555023;178555022 | chr2:179419751;179419750;179419749 |
N2B | 20414 | 61465;61466;61467 | chr2:178555024;178555023;178555022 | chr2:179419751;179419750;179419749 |
Novex-1 | 20539 | 61840;61841;61842 | chr2:178555024;178555023;178555022 | chr2:179419751;179419750;179419749 |
Novex-2 | 20606 | 62041;62042;62043 | chr2:178555024;178555023;178555022 | chr2:179419751;179419750;179419749 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1700830779 | None | 0.968 | N | 0.413 | 0.25 | 0.339316883193 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs1700830779 | None | 0.968 | N | 0.413 | 0.25 | 0.339316883193 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | N | None | 2.41255E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2971 | likely_benign | 0.2578 | benign | 0.036 | Stabilizing | 0.919 | D | 0.45 | neutral | None | None | None | None | N |
K/C | 0.5344 | ambiguous | 0.5087 | ambiguous | -0.178 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
K/D | 0.5136 | ambiguous | 0.4506 | ambiguous | None | Stabilizing | 0.851 | D | 0.423 | neutral | None | None | None | None | N |
K/E | 0.1315 | likely_benign | 0.1142 | benign | 0.023 | Stabilizing | 0.896 | D | 0.448 | neutral | N | 0.511566764 | None | None | N |
K/F | 0.716 | likely_pathogenic | 0.6662 | pathogenic | -0.073 | Destabilizing | 0.988 | D | 0.499 | neutral | None | None | None | None | N |
K/G | 0.4489 | ambiguous | 0.3818 | ambiguous | -0.189 | Destabilizing | 0.851 | D | 0.445 | neutral | None | None | None | None | N |
K/H | 0.2797 | likely_benign | 0.2625 | benign | -0.442 | Destabilizing | 0.076 | N | 0.385 | neutral | None | None | None | None | N |
K/I | 0.2492 | likely_benign | 0.2185 | benign | 0.558 | Stabilizing | 0.984 | D | 0.496 | neutral | N | 0.4885833 | None | None | N |
K/L | 0.3172 | likely_benign | 0.283 | benign | 0.558 | Stabilizing | 0.919 | D | 0.423 | neutral | None | None | None | None | N |
K/M | 0.1775 | likely_benign | 0.1623 | benign | 0.229 | Stabilizing | 0.999 | D | 0.451 | neutral | None | None | None | None | N |
K/N | 0.3651 | ambiguous | 0.3232 | benign | 0.161 | Stabilizing | 0.026 | N | 0.246 | neutral | N | 0.487822831 | None | None | N |
K/P | 0.9538 | likely_pathogenic | 0.9277 | pathogenic | 0.413 | Stabilizing | 0.996 | D | 0.434 | neutral | None | None | None | None | N |
K/Q | 0.1057 | likely_benign | 0.1021 | benign | 0.034 | Stabilizing | 0.968 | D | 0.413 | neutral | N | 0.506544946 | None | None | N |
K/R | 0.078 | likely_benign | 0.0775 | benign | -0.108 | Destabilizing | 0.026 | N | 0.24 | neutral | N | 0.520399678 | None | None | N |
K/S | 0.3729 | ambiguous | 0.3294 | benign | -0.284 | Destabilizing | 0.851 | D | 0.417 | neutral | None | None | None | None | N |
K/T | 0.1399 | likely_benign | 0.1256 | benign | -0.108 | Destabilizing | 0.896 | D | 0.428 | neutral | D | 0.53619585 | None | None | N |
K/V | 0.2116 | likely_benign | 0.1902 | benign | 0.413 | Stabilizing | 0.988 | D | 0.445 | neutral | None | None | None | None | N |
K/W | 0.729 | likely_pathogenic | 0.6857 | pathogenic | -0.111 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
K/Y | 0.5798 | likely_pathogenic | 0.5317 | ambiguous | 0.23 | Stabilizing | 0.976 | D | 0.48 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.